Gardnerella vaginalis 409-05: HMPREF0424_1334
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Entry
HMPREF0424_1334 CDS
T01146
Name
(GenBank) putative ribokinase
KO
K00852
ribokinase [EC:
2.7.1.15
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00030
Pentose phosphate pathway
gva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
HMPREF0424_1334
Enzymes [BR:
gva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.15 ribokinase
HMPREF0424_1334
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GFIT
Motif
Pfam:
PfkB
Phos_pyr_kin
Carb_kinase
Motif
Other DBs
NCBI-ProteinID:
ADB13962
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Position
complement(1596006..1597067)
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AA seq
353 aa
AA seq
DB search
MCSYHMLDSLESLEKIKVIQPVNVALQHETLPALRNMKMPTVAIVGSMNADYTIVANRLP
MPGETIKGNEIRILPGGKSGNQAVSAAKLGAHVCMFGAVGDDANADFLTGALRESGVDTT
YVRHVPNCNSGATVITVDAQSGENTIVYAPGSNSQVDIDYIQSPSVQAAITNAKVLGLCL
ESPLESVTMCARLAHEHGVKVLLNNSPFLDTLPQDLIRSADILLVNEHEMAQLLHISEPD
SGDWDSFDWKHTLHAMHEFGFNEAIVTLGSRGSMVLDYADNSVHRIMAQHVNAVDTTGCG
DAFMGTVLACLSVDMRLVDAASLASYVAAYAATGFGAQASYGTVAQIRQFFHL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagttatcatatgcttgactcgttagagagtttagaaaagattaaagtcattcag
cctgttaacgtggctttgcaacatgagacattgcctgcgttacgaaatatgaagatgcct
actgtagcgatagttggttctatgaatgcggattatactattgttgctaatcgtcttcct
atgcctggtgagaccattaaaggtaacgaaatacgaatactgcctggaggcaagtcaggt
aatcaggcagtatctgctgcaaagcttggtgcgcacgtatgtatgttcggtgctgtaggt
gatgatgctaatgctgattttcttactggtgctttgcgagaatctggtgttgatacgacg
tatgtacgtcatgtacccaattgcaacagtggcgcaacagtgattacagtggatgcgcaa
agtggcgaaaatactattgtttatgcgcctgggtctaactcgcaagttgatattgattat
attcagtcgccatctgtgcaagctgctattactaatgcaaaagtattagggctttgcttg
gaaagtccattagaatcggttacgatgtgcgctcgcttagcgcatgaacatggcgtaaaa
gttttgcttaataattcgccttttttggatacattaccgcaagatcttatacgatctgca
gatatcttactggtcaatgagcatgaaatggcacagctattgcatatttcagaaccagat
agcggtgattgggattcatttgattggaagcatacgcttcatgcaatgcatgagtttggc
tttaatgaggcaatagtaacacttggctcacgtgggtctatggttttggattatgctgat
aattcggtgcatcgaattatggctcagcatgtcaatgccgttgatactacgggttgtggc
gatgcttttatgggtactgtgcttgcgtgtttgtctgtggatatgcggttggttgatgca
gcgtcactcgcttcttatgtagctgcatatgctgctactggatttggcgcacaagcttct
tacggtacagttgctcaaattcgtcaattttttcacttgtaa
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