Gardnerella vaginalis ATCC 14019: HMPREF0421_20066
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Entry
HMPREF0421_20066 CDS
T01344
Name
(GenBank) Thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0421_20066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
gvg02042
]
HMPREF0421_20066
Bacterial toxins [BR:
gvg02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
HMPREF0421_20066
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Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
ADP38152
UniProt:
E3D7C1
LinkDB
All DBs
Position
66002..67627
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AA seq
541 aa
AA seq
DB search
MPCIEANKLRYLIKNNRKYHNIRIHMKSTKFYRNAAMLLLAGATIVPQCLAAPAMAAPSA
KDSEPATSCAAKKDSLNNYLWDLQYDKTNILARHGETIENKFSSDSFNKNGEFVVVEHQK
KNITNTTSNLSVTSANDDRVYPGALFRADKNLMDNMPSLISANRAPITLSVDLPGFHGGE
SAVTVQRPTKSSVTSAVNGLVSKWNAQYGASHHVAARMQYDSASAQSMNQLKAKFGADFA
KIGVPLKIDFDAVHKGEKQTQIVNFKQTYYTVSVDAPDSPADFFAPCTTPDSLKNRGVDN
KRPPVYVSNVAYGRSMYVKFDTTSKSTDFQAAVEAAIKGVEIKPNTEFHRILQNTSVTAV
ILGGSANGAAKVITGNIDTLKALIQEGANLSTSSPAVPIAYTTSFVKDNEVATLQSNSDY
IETKVSSYRNGYLTLDHRGAYVARYYIYWDEYGTEIDGTPYVRSRAWEGNGKYRTAHFNT
TIQFKGNVRNLRIKLVEKTGLVWEPWRTVYDRSDLPLVRQRTISNWGTTLWPRVAETVKN
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcatagaagcaaataagttacggtatctcataaaaaataacagaaaatatcat
aatataaggatacatatgaagagtacaaagttctaccgtaatgcagcaatgttgctcctc
gcgggcgcaactattgttccacaatgcttagcagcaccagcaatggccgctccttccgct
aaggattctgaaccagctacatcttgcgcagctaagaaagactcgttgaataattatttg
tgggatttgcaatacgataaaacaaacattctcgcccgtcatggcgaaaccattgagaac
aaattctccagcgacagcttcaacaagaacggtgaattcgttgttgttgagcatcagaag
aagaacatcaccaatacaacttcaaatttgtcggttacttccgccaacgatgatcgcgta
tacccaggtgctcttttccgtgctgataagaatttgatggacaatatgccaagcctgatt
tctgcaaaccgcgctccaataacgttgagcgttgatttgccgggattccacggcggcgaa
agtgctgtaactgttcagcgcccaaccaagagctctgtaacttccgcagtgaacggctta
gtttctaagtggaatgcacaatatggagcaagtcatcatgttgcagctcgcatgcagtac
gattctgcaagcgcacaaagcatgaaccagctcaaggctaagtttggtgctgattttgcc
aagattggtgttccgctgaagattgatttcgatgcagtacacaagggtgagaagcagact
caaattgtgaacttcaagcaaacttactacaccgtaagcgttgatgcaccagatagccca
gcagatttctttgctccttgcactacgccagacagcttgaagaaccgtggcgttgacaac
aagcgcccaccagtttacgtgtcaaacgtagcttatggtcgctcaatgtacgtaaagttc
gataccaccagcaagagcactgatttccaggctgcggtagaagcagcaattaagggcgta
gaaatcaagccaaacaccgaattccatcgcattctccagaatacttctgttactgcagtg
attcttggtggcagcgctaatggtgcagctaaagttattacaggcaatatcgatacgctt
aaggctttgattcaggaaggtgcaaatttgagcacctctagcccagcggttccaattgca
tacaccacttccttcgtcaaggataacgaagtagcaactttgcaatccaacagcgattat
attgaaacgaaggtttcttcttatcgcaatggctacttgactttggaccaccgtggagct
tatgtagctcgctactacatctactgggatgagtacggcaccgaaattgacggcactcct
tacgtgcgttctcgcgcttgggaaggcaatggtaagtatcgtacagctcacttcaacacc
actattcagttcaaaggaaatgtacgcaatctacgaatcaagttggttgaaaagactggt
ttggtttgggaaccatggcgcacagtatatgaccgttctgatttgccactagttcgtcag
cgtactattagcaactggggcacaaccttgtggcctcgcgttgctgaaactgtaaagaac
gactga
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