Gardnerella vaginalis ATCC 14019: HMPREF0421_20139
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Entry
HMPREF0421_20139 CDS
T01344
Symbol
pbpA
Name
(GenBank) penicillin-binding protein A
KO
K05364
penicillin-binding protein A
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00550
Peptidoglycan biosynthesis
gvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0421_20139 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gvg01011
]
HMPREF0421_20139 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
gvg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HMPREF0421_20139 (pbpA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
ATP-synt_J
Big_11
Motif
Other DBs
NCBI-ProteinID:
ADP38225
UniProt:
E3D7R7
LinkDB
All DBs
Position
155240..156721
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AA seq
493 aa
AA seq
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MEVKVMNKCLKELFTAVIILFVILCVSSTYITSIKSNELNSDPRNRRALYHEFGSPRGAI
LASDGTVLAKSDPSKDAFVYQRSYFNGEVYAPITGYYSISQRADRGIEASRNELLSGQSD
ALFLQKFKSLFTGAENRGASIETSINTKLQTLAYNLLKNKEGALVAIEPKTGRILAMVST
PSYNPSLLASHNVASVNRSYKDLISNIYNPMLNRSISELYAPGSTLKTLIAAAALESGKY
DLNTQIPAGSSYTLPGTRTHLTNVVVPANGVNGQISFEDALAYSSNTAFAQLGISLGSDA
IIKQAKKFGFFSSFTLDGSDSTGFPMRVVTSLLSTKPSQDKLALESIGQGDAKITTLQNA
MIASAIANNGTLMKPTLVDCVRSSDLSVISQTSPTVMSQSISAQTAAKLNSMMQSVVVKE
NSNLSLPNIHVAAKTGTAQIGVKNQSANGWVIGFAPAEDPKIAIAVVVHNANTYGTYTAG
PIMKQVMKEALKQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaagttatgaataaatgtttaaaagagctttttactgcagtaataatatta
ttcgtaatactttgtgtttctagtacttacataacttctataaaatcaaacgagttaaat
tcagaccctagaaatagacgagcactataccatgaatttgggtctcctagaggagcaata
cttgcgtctgatggaacagtattagcaaaatctgatccatctaaagatgcttttgtttat
cagcgctcatatttcaatggtgaagtttatgctccgattacaggatattattcaataagt
caaagagctgatagaggaatagaagcgtcaaggaatgagcttttaagtggacagtcagat
gctttattccttcaaaagtttaagtcattgtttactggagcagaaaataggggtgcttca
atagaaacatctattaacactaagcttcagactcttgcatataatctactaaaaaataaa
gaaggcgctttagttgctatagagccaaaaactggacgaatactagcaatggttagcact
ccaagttacaatccttctcttcttgcttctcacaatgttgcttctgtaaataggtcttac
aaggatcttatatctaatatttataatccgatgcttaatcgttccatttctgaactgtat
gcaccgggatctactttaaaaacacttattgctgctgcagcgttagaatctggaaaatat
gatttaaatactcagattccagctggatcaagctacactcttcctggaactcgaacacat
ttaacaaatgttgttgttcccgcaaatggagttaacggacaaatatcatttgaagatgcc
ttagcttattcttcaaatactgcttttgcgcagttaggaatatcgttagggtctgacgca
ataataaagcaagctaagaaatttggattctttagctcatttactttagatggatcagat
tcaactggtttccctatgagagtagtaacatcattactttctactaaaccatctcaagat
aaattagctctagaatctataggtcaaggagatgcaaagattactacgcttcaaaatgct
atgattgcgtcggctatagctaataatggaactcttatgaaaccaactttggttgattgc
gtaagatctagtgatttgtctgttatatcgcaaacaagtcctactgttatgagccaatct
attagtgcacagacagctgcaaaacttaatagtatgatgcaaagtgtagtagttaaagaa
aattcaaatctttctctaccaaatatccatgttgcagcaaaaactggaacagcgcagatt
ggtgtaaaaaatcagtctgcaaatgggtgggtaattggatttgccccagcagaagaccct
aaaatagctatagcagtagtagttcataatgcgaacacatatggaacttatactgcagga
cctattatgaagcaggtgatgaaggaggctcttaagcaatga
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