Gardnerella vaginalis ATCC 14019: HMPREF0421_20179
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Entry
HMPREF0421_20179 CDS
T01344
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0421_20179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20179
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HMPREF0421_20179
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Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
RsgA_GTPase
tRNA_lig_kinase
MMR_HSR1
AAA_21
AIG1
Rad17
PRK
ABC_ATPase
DUF87
Zincin_1
AAA_22
RNA_helicase
nSTAND3
NB-ARC
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADP38265
UniProt:
E3D7V7
LinkDB
All DBs
Position
201632..202492
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AA seq
286 aa
AA seq
DB search
MNMNVNETNKTQSENGDVPIIELRDAEVVFTTRAGSGLFHKNKITAVNKVNLKLMPGKTI
GIVGESGCGKSTTANIMCGLQQVTSGKVLFKGQDVTHRTAKERMDIGRVVSVVFQDPAMA
LNARMSVIDQLIDPLVVHKIGSKAERDARAKELIRMVGLPHSVLGALPGQLSGGQRQRVA
IARALSLNPDAIIADEPTSALDVSVRAQILNLLSDLKKKLNLSMVFISHDIQTIRYISDE
VVVMNHGTIVERGETHQVINNPQDEYTKILMGAAPSLLHPTEEECK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaatgttaacgaaacaaacaaaactcaaagcgaaaatggcgatgttccaatc
atcgagttgcgcgacgccgaagtggtgttcactactcgagcaggatctggcttattccac
aagaacaagattacagccgtaaacaaggtgaatcttaagcttatgccaggcaagacgatt
ggtattgttggcgaatctggttgcggaaagtctactactgcaaacattatgtgcggtctt
cagcaagttacaagcggcaaggttttgtttaaaggtcaagacgttacgcatagaactgca
aaagagcgcatggatattggacgcgtggtttccgttgtgttccaggatccagcaatggct
ttgaatgcgcgcatgagtgtgattgaccagttgattgacccgcttgttgtgcacaagatt
ggaagcaaagctgagcgcgatgctagagccaaggaactaatacgaatggttggtttgcct
cactctgttcttggcgctttgccaggtcagctttctggcggccagcgtcagcgcgtggca
atcgctcgtgcgctttcgcttaacccagatgcaataatcgcagatgagccaacttccgct
ttggatgtttctgtgcgtgctcagattttgaatcttctttccgacttaaagaagaagctg
aatctttccatggtgtttattagccacgatattcaaacaattagatacatatccgacgag
gttgttgttatgaatcatggaacgattgttgagcgtggcgaaactcaccaggtgattaac
aatccgcaagatgagtacacaaagattttgatgggcgcggcgccttcgctgttgcaccca
acggaagaagagtgcaagtag
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