Gardnerella vaginalis ATCC 14019: HMPREF0421_20186
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Entry
HMPREF0421_20186 CDS
T01344
Name
(GenBank) BNR/Asp-box repeat protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00511
Other glycan degradation
gvg00600
Sphingolipid metabolism
gvg01100
Metabolic pathways
gvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
HMPREF0421_20186
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
HMPREF0421_20186
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
HMPREF0421_20186
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
HMPREF0421_20186
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
ADP38272
UniProt:
E3D837
LinkDB
All DBs
Position
complement(207235..209958)
Genome browser
AA seq
907 aa
AA seq
DB search
MERRSTKTTSLIEDIADIKGSEHTRFNHATIKITPSSEIKKYSENESGINRKDKNEEINQ
NEGIIGFKFVANSDCDLLDIKPAQKSEASAQQEHTTPIIKISIKEDAPLLSAQNLLEDSA
DANGAKEIALQMEDALGACDGREHDFAITYGSFGSRFYLDGYQCFASATNLGPQRVSGKA
AEVCAAQAESSQIYDFYYSSHLPNPEEIANSATQAQPDIWFAGPTICARDIKRVSCNSSG
TLHIQFRLRGPGQHGVLFAAGTVGTKTNLESSEKISVYAGPEGIKITLIDSETCIKSVIE
AAASVDDGEWHDLIIRANRGAIDIYVDGYSESHNIGQFWFANIPELNAVSIGEDLRGVRL
MGEARTGGIYFSALTEGQIQRISRVKPLVTTALFDTGYAGSRSYRIPSLVKTRMGTLIAG
ADQRTSVSNDAPNHINFVIRRSTDGGKTWKPLQTVINMPGKNLGKLGASAIDSCPILDPA
GKSERINVLIDLNPSGIGLTNCKTDVGVDECGRIKMEDRFGRHYAALMDGSAAVKLPCDS
SEKECATKWLVFPDGSIKNCDSHNDLRNNSHSNQTCDSSTWNIWKSQEIASESQPLFAEK
TCYIAQIYSDDDGKTWSATRLIDHMVKEPWMSFAGVCPGNGIVIRQSEKHYGRILVPFYC
SGKSKSHYSSGALISDDDGKTWSRGKMINEGRLINGKIVDPATMQDDDATSSETVFVERK
NGDILAFFRNQNRSGCVGKAISHDCGETWSELIFDTSLPEIFSQPSATCFNSENADNADC
IAFANASQMMPYRGRGVVRFSYDGGKTWAKSVCINPFHHVYQCLSSSNKRTLQLLWERET
TGIYITAIDSNLWKQDNLQIDFKSNAKSLNNTDLDCIKNKINTSEKMKDLEEGSLTRTER
SQHGRDI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcgttcaacgaagacgacgagccttattgaagatatcgcggatatcaaaggt
tcggagcacacgcgattcaaccatgccacaataaaaattacaccatctagtgaaatcaaa
aaatatagcgaaaacgaatcgggaatcaatcgcaaagataaaaacgaggaaataaatcag
aacgaaggaataatagggtttaaatttgtagcaaattcggattgtgatttattagatatt
aagcccgcgcaaaagtcggaagcttctgcacaacaagagcacacaactccaataataaaa
ataagtattaaagaagacgctcccctgcttagtgcacaaaatcttttagaagatagcgcc
gacgcaaacggtgcgaaagaaattgcactacaaatggaagatgcgctaggcgcatgcgac
gggcgcgaacacgattttgcaataacgtacggaagttttggaagccgattctatttagac
ggataccaatgctttgcgagcgcaacgaatcttgggccgcaaagagtgagcggaaaagcg
gccgaagtgtgtgcagcgcaggcagaatcttcgcaaatctacgacttttactactcaagt
cacttgccaaatccagaagaaatcgcaaattcggccactcaagcacagccagacatatgg
tttgcaggacctacgatttgtgcaagagacataaaacgcgtatcttgcaactcaagcgga
actttgcacattcaatttagattgcgcggacctggccaacatggagtgctttttgctgct
ggaactgttggaacaaaaactaatctagaatctagcgaaaaaataagcgtgtacgcagga
ccagaaggcataaaaatcacgctaatcgacagcgaaacgtgcataaaaagcgtaatcgaa
gcagccgcaagcgttgacgacggcgaatggcacgacttgattattcgcgcaaatcgcgga
gcaatcgacatttacgtagacggatacagcgagtcacacaatataggacaattctggttt
gcaaatataccagaattaaacgcagtgagtataggcgaagacttgcgcggagtgcgacta
atgggcgaagctagaacaggcggaatctactttagcgcactaaccgaaggacaaatccaa
agaatatcaagagtaaagccgcttgtaacaaccgcattattcgatacgggatatgcgggc
tctcgcagctacagaataccgtctcttgtaaaaacgcgcatgggaacgctaatcgcagga
gcagaccagcgaacaagcgtttcaaacgacgctccaaaccacataaactttgtgattcgc
agatccacagatggcggaaaaacgtggaagcctttgcaaaccgtaatcaacatgcctggc
aaaaaccttggaaaactgggcgcgagcgcaatcgactcctgccctattttagatccagcg
ggaaaaagcgaaagaattaacgtattaatagaccttaatcctagcggaattgggttaaca
aattgcaaaaccgatgtaggcgttgacgaatgcggaagaatcaagatggaagatcgcttt
ggcagacactacgcagcattgatggatgggagcgcggccgtaaaactgccatgcgattct
agcgaaaaagaatgcgcaacaaagtggctagttttcccagacggaagtataaaaaattgc
gattcgcacaatgacttacgcaataactcgcacagtaatcaaacttgcgacagttccacg
tggaacatatggaaatcgcaagaaattgcaagcgaaagtcagccattattcgccgaaaaa
acgtgttatatagcgcaaatctactcggacgacgacggcaaaacgtggagcgcgacacgt
ctaatcgatcacatggttaaggagccatggatgagcttcgctggagtatgcccagggaat
ggaattgttattagacaaagcgagaaacattacggcagaatacttgtgccattctattgc
agcggcaaaagcaaatcgcactattcttcgggagcgcttatttcggacgacgacggcaaa
acatggagccgaggcaaaatgattaacgaaggacgattaatcaacggaaaaatcgtagac
cctgcaacaatgcaagacgacgatgccacaagctccgaaactgtgtttgttgaacgcaaa
aatggcgacattctagctttcttccgaaatcaaaatcgctcgggatgtgtaggcaaagcc
attagtcacgattgcggagaaacgtggagcgagctgatttttgacacaagtttgccagaa
atattcagccagccgagcgcaacctgttttaacagcgaaaatgcagacaacgcagactgt
atagcgtttgcaaacgcaagccaaatgatgccttatcgcggtcgcggagttgtgaggttt
agctacgacggcggaaaaacgtgggcaaaaagcgtgtgcataaacccattccaccacgtt
tatcaatgccttagctctagcaataaacgaactttgcaactactgtgggaaagagagact
actggaatttatataacagcaatagattccaatctttggaagcaggataatttacaaata
gattttaaaagcaatgcaaaaagtttaaacaatacagacttagattgtataaaaaataaa
ataaacacaagtgaaaaaatgaaagatttagaagaaggaagccttacgcgaactgaaagg
agccaacatggaagagacatttaa
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