Gardnerella vaginalis ATCC 14019: HMPREF0421_20197
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Entry
HMPREF0421_20197 CDS
T01344
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvg03000
]
HMPREF0421_20197
Transcription factors [BR:
gvg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HMPREF0421_20197
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_4
Peripla_BP_1
HTH_24
HTH_AraC
HTH_3
HTH_Crp_2
HTH_Tnp_ISL3
HTH_26
HTH_31
MarR_2
Sigma54_DBD
HTH_IclR
HTH_23
HTH_Tnp_4
HTH_38
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ADP38283
UniProt:
E3D848
LinkDB
All DBs
Position
223732..224754
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AA seq
340 aa
AA seq
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MGGAMTYITIRDVAQHAGISVSTVSRALNNTGRISANTKAKVERAVAQLGYIPDSRAQAM
RSLRTKTVGLLVPDIRNAYFAELAYTVQDSLFEAGYCAFIGTSSESASRQDSFITSILSQ
RIDGAIIVPQGEVTEAMRKLIEQRLPMLFMDRHVEPQAGGLEHVPVVDSDPTKGIRDALL
DVLQHGFHSVGYISGPIIASPSLQEREQAFRTVASEIFGEEHVFVESTGFDQSSCASVMH
RMINVGVKALIIGYSPDALRVMQVMAQEGLVIGKDISLISFDDVEVFRLATPRISVISQQ
VQRIGHISAALFLDMLENNGDVKSQRVETVYIPRESLGRA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgctatgacgtatattacgattcgcgatgttgcacaacatgctggaatatca
gtgtcaactgtgtctcgtgcattaaacaacacgggtcgtatatcggcaaacaccaaggca
aaagttgagcgtgcggttgctcaattaggttatatcccagattcgcgcgcgcaagcaatg
cgatcgttacgcacaaaaacagtaggactgcttgtgccagacattcgtaacgcatatttt
gccgaactcgcttacactgttcaagactcattgtttgaggcaggctattgtgcatttata
ggaacatcatctgaaagtgcatctcgtcaagattcatttataaccagtattctttcgcaa
cgtattgatggggcgattatagttcctcaaggtgaagttactgaagctatgagaaagctg
attgagcagcgactccctatgttgtttatggatcgccacgtagaaccgcaagctggcggc
ttagaacacgtaccagtagttgattcagacccaacaaagggcattcgtgatgcgctgtta
gatgttctgcaacatggttttcactcagttggctatatttctggcccaattattgcttcg
ccctcgttgcaagaacgtgagcaagcatttagaaccgtggcttcagagatatttggcgaa
gagcatgtattcgtagaatcaacaggatttgaccagtcgtcgtgtgcaagcgtaatgcat
cgcatgattaatgttggagtgaaagctcttattattggctattcgccagatgcgttgcga
gtaatgcaagtgatggctcaagaaggattagtaataggcaaagatatatcattgatttct
ttcgatgatgtagaagtgtttcgcctagcaactccacgtatttctgtgatttcacagcaa
gttcaacgtattggccacataagtgctgcactgtttttagatatgcttgagaataatggt
gacgttaaatcgcagcgtgtagaaactgtgtatatccctcgcgaatcgctagggcgagca
tag
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