Gardnerella vaginalis ATCC 14019: HMPREF0421_20199
Help
Entry
HMPREF0421_20199 CDS
T01344
Name
(GenBank) branched-chain amino acid ABC transporter, permease protein
KO
K10440
ribose transport system permease protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_20199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20199
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HMPREF0421_20199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
O_Spanin_T7
Motif
Other DBs
NCBI-ProteinID:
ADP38285
UniProt:
E3D850
LinkDB
All DBs
Position
226647..227684
Genome browser
AA seq
345 aa
AA seq
DB search
MNCWKLVKGVFVMSATKSEKSHRLGYGADDKGFLPTLKKFASRNGALIGLIILCAALSCA
TPAFLTSVNILNVGIQAATVAILAFGQTFVIVSAGIDLSVGAVAAISSMLVAYTGASMGL
PPILTIIIGVATGAVFGLISGVANAFLKLPSFIATLAMMSVARGLTLVVSDGRPISTSGM
VNFFGATICGIPMPIVMMIIMGVISAIILNFTTTGRSMYAVGGNMEASRLSGINIHKTQI
MVFILSGVFAAVAGLVIAGRLHSAQPQAATGYEMDAIASVVIGGASLSGGKGKISGTFVG
AILLAVIRNGLNILNVSSFWQQVVIGLVIAFAVSLDTLRRKEDTH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgttggaaactcgttaaaggagtatttgttatgagtgctacaaagagcgaaaaa
tctcaccgtttagggtatggtgcagacgacaaaggatttttgccaacgttaaaaaagttt
gcatctcgtaatggtgcacttattggtttgattattttgtgtgcagcgctttcttgcgct
acgcctgcatttttaacaagtgtaaatattctcaacgttggcattcaagctgctacggta
gcaattttggcatttggtcaaactttcgtaatcgtttccgctggaattgatttgtcggtt
ggtgcagttgctgcgatttctagcatgcttgttgcttacactggcgcttctatgggctta
cctccaatattgactattattattggtgtagctacaggtgcagtttttggcttaatttct
ggcgttgctaatgcttttcttaagctgccgtcgtttattgccacgttggcaatgatgtct
gtggctcgtggacttacgctggttgtttcggatggtcgtcctatttccacttcgggcatg
gtgaatttcttcggagcaacaatatgcggaatccctatgccaatagtgatgatgattatt
atgggcgttatttccgcaataatcttgaacttcactactacaggtcgttcaatgtatgct
gttggcggaaatatggaagcatctcgtctttctggcataaacattcataaaactcaaatt
atggtgtttattctttctggcgtttttgctgctgtagctggtttagtgattgcagggcgt
ttgcattctgctcagcctcaagcagctaccggttacgagatggatgctatagcgtctgtg
gttattggtggcgcatcgctttctggaggcaaaggtaagatttcaggcacattcgtaggc
gcaatacttttggctgttattcgtaatggcttgaacattttgaacgtttcttccttctgg
cagcaagttgttattggcttggtgattgcgtttgctgtaagcctcgatactttgcgacgc
aaggaagatactcactga
DBGET
integrated database retrieval system
