Gardnerella vaginalis ATCC 14019: HMPREF0421_20200
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Entry
HMPREF0421_20200 CDS
T01344
Name
(GenBank) sugar-binding domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_20200
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HMPREF0421_20200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20200
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HMPREF0421_20200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PA
Motif
Other DBs
NCBI-ProteinID:
ADP38286
UniProt:
E3D851
LinkDB
All DBs
Position
227980..228921
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AA seq
313 aa
AA seq
DB search
MMNYLVMRRGMKLACAVAAASALVFSMSACGNASSSDKVALLVSTLNNPFFVDLRDGAQA
EAKKLGVDLQVSDAQNDSSKQQDQAQNAQSQGAKAVIINPVDSDAAGPAVAPLLSSGMPV
ISVDRSVTGEKVTSHIASDNVAGGAQAADALAKSMGEKGEVLILQGIPGAASTRDRGKGF
KDRIKKYPNIKVVAEQTANFDRAEALNVATNLLQSHPNAAGIYAENDEMALGAIQSLGAK
AGKDVKVVGFDGTADGMKAIKAGTMAGTIAQQPKELGRSAVAAAVKAIKKQTVPKTEPIT
VKTVTAKNVADFE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattatctagttatgcgccgtggtatgaagctcgcttgtgctgttgcagcagca
tcggctcttgttttcagcatgagtgcgtgtggaaatgcaagctctagcgacaaggttgcg
ctgttagtgtctacgctaaataatccattctttgtggatttgcgtgatggtgcgcaagcg
gaagccaagaagctgggagttgatttacaggtttcagatgctcagaacgattcttctaag
cagcaagatcaggctcaaaacgcgcaatctcaaggtgctaaagcagtaattataaatcct
gtggattccgatgctgctggcccagccgttgcgccacttcttagctctggtatgcctgtg
atttctgtggatcgttccgtaactggcgaaaaagttacttctcacattgcctccgataac
gtggcaggaggtgctcaagctgccgatgcgctcgctaagagcatgggagaaaagggcgaa
gttctaattttgcaaggcatcccaggtgctgcttctacgcgagatcgtggcaaaggtttt
aaagatcgcattaagaagtatccaaatattaaggttgttgcggagcagactgctaacttt
gatcgtgctgaggcgttgaacgttgcaaccaacttgttgcaatctcatccgaacgcagct
ggcatttacgccgagaatgacgagatggcattaggtgcaatccaatcattaggtgctaaa
gctggtaaagatgttaaagtagttggcttcgatggtactgccgatggcatgaaggccatt
aaggctggaacaatggctggcactattgctcagcaaccaaaggagcttgggcgttctgcc
gttgctgcagctgtaaaagccattaagaagcaaactgttccaaagactgagccaattact
gtgaaaacagttacagcaaagaatgtagccgatttcgagtaa
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