Gardnerella vaginalis ATCC 14019: HMPREF0421_20240
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Entry
HMPREF0421_20240 CDS
T01344
Name
(GenBank) ABC transporter, permease protein
KO
K15772
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_20240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20240
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF0421_20240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
FWWh
SPC25
Tom5
Motif
Other DBs
NCBI-ProteinID:
ADP38324
UniProt:
E3D889
LinkDB
All DBs
Position
complement(280269..281189)
Genome browser
AA seq
306 aa
AA seq
DB search
MSNKKDLMQGEQTVHSVRSVPFWRDQRIRRIFGDIVAHLFLIVMAVIWLAPIVWVFLESF
NQNTAPYQTTFFPTKYTFNNYIQLFTEREVLDFPRMFLNTLIVSIFVCIISLFFVLVVAF
CMSRLRFRGRKTFMNIALILGMFPGIMAVIAIYFILKAFGLTNGSVVLISLIIVYSAGSG
MGFYVMKGYMDTIPKSLDEAAYLDGCTTWQVFWKIILPICKPMIVFQAIVSFLGPWLDFV
LVKTIARTQDNYTVALGLYQMLQREYINHWFARFSAGAVCVSIPIAILFIVMQRFYEESM
SGSVKG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataagaaggatcttatgcaaggcgaacagactgtgcatagtgtacgtagtgtc
ccgttctggcgcgatcagcgtatacgccgcatattcggagacattgtagctcatctgttc
ctgattgttatggctgtgatttggcttgcgccaatcgtttgggtgttcttggaaagcttt
aaccagaacactgcaccatatcagacaacgttcttcccaactaagtacacgtttaataat
tacattcagctgtttactgagcgagaagttcttgacttcccacgaatgttcttaaacacc
ttgattgtgtctattttcgtgtgcattatctctctgttcttcgtgcttgtagtagcgttc
tgcatgtctcgtttgcgtttccgcggtcgtaagacatttatgaacattgctttgattctt
ggtatgttcccaggcatcatggcagttatcgctatctacttcattttgaaggcttttggc
ttgacgaatggttctgttgttcttatttcccttataatcgtttactctgctggtagcggc
atgggcttctacgttatgaagggctatatggacacgattccaaagtctttggatgaagcc
gcttatttggatggatgcacaacttggcaagtattctggaagattattcttccaatctgc
aagcctatgattgtgttccaagctattgttagcttcttgggtccatggcttgacttcgtt
ttggttaagactattgcccgtactcaagataattacactgtggctttgggcttgtaccag
atgttgcagagagaatacatcaatcactggttcgcacgattctctgctggagctgtgtgc
gtttccattccgattgcaatcctgtttattgtcatgcagcgattctatgaagagtcgatg
tctggctctgttaagggatag
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