Gardnerella vaginalis ATCC 14019: HMPREF0421_20242
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Entry
HMPREF0421_20242 CDS
T01344
Name
(GenBank) ABC transporter, solute-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_20242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20242
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
HMPREF0421_20242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADP38326
UniProt:
E3D891
LinkDB
All DBs
Position
complement(282748..283977)
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AA seq
409 aa
AA seq
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MTNMKKVLGAGLAIATMFGFAACGSSTNAGSSNKANPVKLTVWSSSEDQKAGGWIQAMEK
AFKKDHPEVTFKNAVVAPPDAAKTVKQDAKAAADVYLFPNDQLGDLVKANAIGELSDDAA
KQVKEDNDDTIIQSVTAQDGKLYGVPYMGNTWFMYYDKSKFSDEDVKSLDKMLEKGKVAF
DISNAWYLPGFYLDGNMTLFGEKSNDGKAGIKIGDKAAEITKYVAKFIQNKNFVMDGDGA
GLAGIKNHTVDAYFSGSWDAGDVKKALGDNYAAAQLPKFKSEDGEHQMKSFAGSKAVAYN
PNSKAPEMAAKFAAFLGSKESQEQMYKLHGDIPVAKSLSDLVKDNPAAVAQMNTIAKTSV
LQPTVPEMGAFWDPMKTFGTALANKEVNDGNAAAKIADFQKGFEEALKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatatgaagaaagtgctgggcgcaggcctcgcaatcgctacaatgtttggattt
gctgcatgcggttctagcaccaacgctggctccagcaacaaggcaaacccagtaaagctc
accgtgtggtcttcttccgaagatcagaaggctggcggctggattcaggctatggagaaa
gccttcaagaaggatcacccagaggttacttttaagaacgctgttgttgctccaccagat
gctgctaagaccgttaagcaggacgctaaggctgctgccgacgtttacctgttccctaac
gatcagctcggcgacttggtaaaggcaaacgcaattggcgagttgagcgacgacgctgcc
aaacaggttaaggaagacaacgatgataccatcatccagtctgtaaccgctcaggatggc
aagctttatggcgttccatacatgggcaacacttggttcatgtactacgataagtccaag
ttctccgacgaagacgttaagtccctcgataagatgctcgaaaagggcaaggttgctttc
gatatcagcaacgcttggtaccttccaggcttctacctcgatggcaacatgaccctcttc
ggcgagaagagcaacgatggcaaggctggcatcaagattggtgataaggctgccgaaatc
accaagtatgttgcaaagttcattcagaacaagaacttcgtaatggatggcgatggcgct
ggcttagctggcattaagaaccacaccgttgacgcttacttctctggctcttgggatgct
ggcgatgtaaagaaggctttgggcgacaactacgctgctgctcagcttccaaagttcaag
tctgaagatggcgaacatcagatgaagtccttcgctggctctaaggctgttgcttacaac
cctaactccaaggctccagagatggccgctaagttcgctgcattcctcggttctaaggaa
tcccaggagcagatgtacaagcttcacggcgatatcccagttgctaagtctttgtctgat
ctcgttaaggacaacccagccgctgtggctcagatgaacaccattgctaagacttctgtc
ttgcagccaaccgttccagaaatgggtgccttctgggatccaatgaagaccttcggtact
gcattggcaaacaaggaagtcaacgacggcaacgccgctgcaaagattgcagacttccag
aagggctttgaggaagctcttaagaagtaa
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