Gardnerella vaginalis ATCC 14019: HMPREF0421_20243
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Entry
HMPREF0421_20243 CDS
T01344
Name
(GenBank) alpha amylase, catalytic domain protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00500
Starch and sucrose metabolism
gvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0421_20243
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
ADP38327
UniProt:
E3D892
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Position
284460..286166
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AA seq
568 aa
AA seq
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MQNEHAQWLRDAVFYEIYPQSFYDSNGDGIGDIPGIIEKLDYVKSLGCNAIWLNPCYDSP
FKDAGYDVRDYKKVAARYGTNEDLQRLFSEAHNRGMHILLDLVPGHTSEEHEWFKQSSRA
QENEFSKRYIWTDSAFSGYSMPFIGGESERDATYILNFFKCQPALNYGFAQRDRAWQSAP
DSEEAAQTRAAMVDVMRFWLSLGADGFRVDMADSLVKNDDNNGEGSLGKDNTIHAWQEML
GAVKAEYPQAAFVSEWGRPRQALAAGFDMDFYLNWRWDGQPNGYARLARDVDNALDSNPE
HDHSYFNARGGGSICPFLDDYCPQYEATCNDGYFSFITCNHDTPRLAPRLDDRERRVAFG
MILTMPGVPFVYYGDEIGMKYRDIPTKEGGYARTGTRTPMQWDDSKNFGFSTAAKSKLYL
PVEARADGRTCANSRKQAVESGEIPTVLGQEQDGDSLLNWVRALIALRHECAALHADATW
RVLHAPVDGRSFAYERCAAESNVSDGESSTDRCIVVMNPGLNEETIALSALAGLTPEAIL
QPRLSVGAVACDSSALKLGAQSFAVFAL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgaacatgcacaatggctgcgcgacgccgtgttctacgaaatctatccacaa
agcttctacgattcaaacggcgacggaataggcgatattccaggcataatcgaaaagctc
gactacgtaaaatcgcttggatgcaatgcgatctggctaaatccttgctacgattcgcca
tttaaagatgcgggctacgacgtgcgcgactacaaaaaagtggcagcgcgctacggcaca
aacgaggatttgcagcgtctttttagcgaagcacacaatcgcggaatgcacattttgcta
gaccttgttccaggacacacaagcgaagagcacgagtggtttaagcaaagctcgcgcgcg
caagaaaacgagtttagcaagcgatatatatggaccgacagcgcgtttagcggctattcc
atgccgtttattggcggcgaaagcgagcgagatgccacgtatattctgaacttcttcaaa
tgccagccagcgctaaattacggttttgcgcaaagggatcgcgcgtggcaatccgcgcca
gattctgaggaggcggcgcaaactcgcgctgcaatggttgatgttatgcgattctggctt
tcgcttggagcagacggcttccgcgtagacatggcggattcgcttgtaaaaaacgacgac
aacaatggcgaaggaagccttggcaaagacaacacgattcacgcatggcaagaaatgctg
ggtgctgtaaaggccgagtatccgcaggctgcgttcgtttcggagtggggcaggccgcgt
caggcgctggctgctggattcgacatggacttctatttgaattggcgctgggatgggcag
ccaaacggatatgcgcgcttagctagagatgtggataatgcgctagacagcaatcctgag
cacgaccacagctactttaatgcgcgtggtggcggcagcatttgcccatttttagacgat
tattgcccacaatacgaggctacttgtaacgacggctactttagctttataacgtgcaat
cacgatacgccgcgtttagctccgcgtcttgacgatcgtgagcgtcgcgtggctttcggc
atgattcttacaatgccaggcgtgccgtttgtgtattatggcgacgaaatcggcatgaaa
taccgcgatattcctacaaaagagggaggttatgcgcgcacgggtacgcgtacaccaatg
caatgggatgattccaagaattttggattctccacggccgcaaagtcgaagttgtatttg
cctgttgaagcgcgcgcggatggaaggacctgcgcaaattctcgcaaacaagcggtagaa
agtggcgaaattccaacggttttggggcaagagcaggatggtgattcgctgcttaactgg
gtgcgcgcgctgattgctttgcgccacgagtgcgcggcgctgcacgcggatgccacttgg
cgagtgttgcatgcgcctgtggatggtcgcagctttgcatacgagcgatgcgcggctgag
tcgaatgtgtcggatggcgaatcctctacagatagatgcattgtggttatgaatcctgga
ttaaacgaggagacgattgcgcttagcgcgcttgcggggcttacgccagaggcgattttg
cagccgcggctttcggttggagcggttgcttgcgattcttccgcgcttaaactaggcgcg
cagtccttcgccgtgtttgctttataa
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