Gardnerella vaginalis ATCC 14019: HMPREF0421_20249
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Entry
HMPREF0421_20249 CDS
T01344
Name
(GenBank) glycosyl hydrolase, family 31
Organism
gvg
Gardnerella vaginalis ATCC 14019
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Glyco_hydro_31_3rd
Motif
Other DBs
NCBI-ProteinID:
ADP38333
UniProt:
E3D8D9
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Position
291752..294535
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AA seq
927 aa
AA seq
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MTLQDAREARGTQDVQDTHIFYDYAKNPMSKAKESQVISGKNWRITLITDSLVRLEWSEN
GGFVDAPTQTVVRRNFEAGTQFAAEKSQATEDEASRAFNPKYSVKNLENDWIEVETEKLL
ITYNQQPFSKEGLSIVVRGVPGSQFNTWHYGDECHGNLLGTARTVDEADGAVKLGTGVIS
RDGWAVLDDSRSAQIAYAAAVDGKENPYGAWVEPREKADGSVSGENSGENSKDLYFFGYG
HNYIGAIRDFYKLTGAQPLLPRFALSNWWSRYYRYSQDEYLQLMSRFKREGIPFSTAVID
MDWHVTDVDPKYGSGWTGYTWNRDLFPDHRAFLRRLASEGLSATLNLHPRDGVRAFEEDY
AQVARDMGIDPASGKAVEFDLTNPRFLRAYLNMHRRMENEGVGFWWIDWQQGGVTKQAGL
DPLWMLNHVHYQDSGRGGAWPITFSRYAGPGSHRYPVGFSGDSVTTWDSLAFQTYFTSTA
SNIGYGWWSHDIGGHMLGLRCDELEARWYAFGAFSPINRLHSSCSPFAGKEPWNFPRETR
DAMVKMLRLRAQMLPYLYTMNYRAAVCGRPIVEPMYWQSPETPAAYEMPNEYRFGSQLVV
APIVSKGRAQVERGCTAVWLPEGDWYDFFDGRRYVSRGGAGRRFEVWRGIDRVPAFARAG
AIIPMQVLPSEASCASSEQAAAAVNSIENPRSLRVLAFPGDCGEFVMREDNGRFEDACAG
KTADTRMELIWRDGNGSTQFVIDAAKGCASAVSSLPSKRDWSVVFRGVACPDFSRIRVFV
GENQLESKAVEVSYEGEEGDLSLIVSVRNVPVCDCVRVIVDSGLCIAQDPKIGDCYRLLL
QAQMPYRGKEIAFDAIRQAGGSASAISELCALEYTSESEFERHQQSVDLTNAHAPQHPEV
AKWAQWKCTLPDSVKRALEEILLRSAL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgactttacaagatgcgcgtgaagcgcgtggaacacaggatgtgcaagacacacacatt
ttttacgattacgctaaaaatccgatgtctaaagccaaagagtcgcaggttataagcggc
aaaaattggcgaatcacgttaatcacggattcgcttgtgcgccttgagtggagtgaaaac
ggcggatttgtagacgcgcctacgcaaacagttgtaagacgaaacttcgaggctggcacg
cagtttgccgcggaaaagtcgcaagcaaccgaagatgaggcatcgcgcgcttttaatcca
aaatatagtgtaaaaaacttggaaaatgactggatagaagtcgaaaccgaaaaactactg
atcacgtacaaccagcagccgtttagcaaagagggcttgagcattgttgtgcgcggagtg
ccaggctcgcaattcaacacgtggcattacggcgacgagtgccacggcaatttgctcggc
acagcgcgaacagtggacgaggcggatggagccgttaagcttggaacgggcgtaatatct
cgcgacgggtgggctgtgttagacgattcgcgctcggcacaaatcgcgtatgcggctgct
gttgatggaaaagaaaacccatacggggcatgggtggagccgcgtgaaaaggcggatggc
agtgtgtctggggaaaactctggcgaaaactctaaagacctatacttctttggctacggt
cacaactatataggcgcaattcgcgacttttacaagcttacgggcgcgcagccgcttctt
ccgcgatttgcgctaagcaactggtggagcagatactacaggtacagccaagacgaatat
ttgcagctgatgagccgatttaagcgcgaaggaataccgttctccacggcagtaatcgac
atggattggcacgtgacggatgtggacccaaagtatggttcgggatggactggctacacg
tggaaccgcgatttattcccagatcatcgcgcgtttttgcgcagacttgccagcgaaggg
ctttctgcaacgcttaatttgcacccgagagacggcgtgcgcgcgtttgaagaagactat
gcgcaagttgcgcgcgatatgggaattgaccctgcaagcggcaaggcagttgagtttgac
cttacaaatccgcgctttttgcgagcatacctaaacatgcatcggcgcatggagaacgag
ggcgttgggttctggtggattgactggcagcagggcggagttacaaagcaggctggcttg
gatccgctttggatgcttaaccacgtgcactaccaggattcggggcgcggaggcgcgtgg
ccgataacgttctcgcgctacgcggggcctggctcgcaccgctacccagtgggattctcg
ggagatagcgtaacaacgtgggattcgctggctttccaaacttactttacttctacggcg
tctaacattggctacggctggtggagccacgatattggcggacacatgcttggcttgcga
tgcgatgagctggaggcgcgctggtatgcgtttggcgcgtttagcccgattaatcgcctt
cactccagctgctcgccgtttgcaggcaaggagccgtggaacttccctcgtgaaactcgt
gacgcgatggttaaaatgctgcgacttcgcgcgcaaatgctgccttatttatatacgatg
aactatcgcgcggcggtttgcggaaggccgattgtagagccaatgtattggcaatcgcca
gaaacacctgcagcgtacgagatgccgaatgagtaccgttttggcagccagcttgtggtt
gcgccaatcgttagcaaggggcgcgcgcaagttgagcgcgggtgcactgccgtttggctt
ccagaaggcgattggtacgatttctttgacggaaggcgctacgtttcgcgcggcggtgct
gggcgcagatttgaggtttggcgaggaatcgaccgcgtgccggcgtttgcgcgcgctggt
gccattattccaatgcaagttttgccaagtgaggcgtcttgtgcaagtagcgagcaggcg
gcggctgcggttaatagcattgaaaatccgcgatctttgcgcgttctcgcattcccgggg
gattgcggcgagtttgtgatgcgcgaagataacggacgatttgaagacgcgtgcgctggg
aaaactgccgatacgcgcatggagcttatttggcgagatgggaatggatccacacagttt
gtgattgatgcagcaaaaggatgcgctagtgctgtttcttcgctgccttccaagcgcgat
tggagcgtggtatttagaggtgttgcttgcccagacttttcgcgcattcgcgtttttgtt
ggggaaaatcagcttgaatctaaggctgtagaagtttcatatgaaggcgaagagggcgac
ttaagtcttattgtttctgtgcgcaacgtgcctgtttgcgattgcgtgcgagtgattgtg
gatagcggactgtgcattgcgcaagatcctaagattggcgattgctacaggctgctttta
caagcgcaaatgccgtaccgcggcaaggagattgcttttgacgcgattcgccaggctggt
ggtagcgcgagtgctataagtgagctttgcgcgcttgagtacactagcgagagcgagttt
gagcgacatcagcaaagcgttgacttgactaatgcgcatgctccgcagcacccagaggtt
gctaagtgggcgcaatggaagtgcacgctgcctgattcggttaagcgcgcgcttgaggag
attttacttcggagcgcgctgtaa
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