Gardnerella vaginalis ATCC 14019: HMPREF0421_20280
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Entry
HMPREF0421_20280 CDS
T01344
Name
(GenBank) S-adenosylmethionine-dependent methyltransferase, YraL family
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvg03009
]
HMPREF0421_20280
Enzymes [BR:
gvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
HMPREF0421_20280
Ribosome biogenesis [BR:
gvg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF0421_20280
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
DUF6230
Motif
Other DBs
NCBI-ProteinID:
ADP38364
UniProt:
E3D8H0
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All DBs
Position
332724..333617
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AA seq
297 aa
AA seq
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MRNEEDNLGKVVLAATPIGNMGDASSRLINLLETADIVAAEDTRRLYDLANRLGVHVSGQ
VIAYHDHNEHNKADGLLDKVEQGNTVLVVSDAGMPTINDPGLAIVRRAIERDLPVTCAPG
PSAVLDALALSGLPTDRFCYEGFLPRKSGDRQQHLRSLLSERRTIVFYEAPHRIAESMED
LLAVFGADRKMALCRELTKDFEEIRRGTISQICKSVENDPPRGEIVLVIAGASDEEIKQR
NIDLSVEQLAQMSYDLSQNEGLRIKDAITRIVSQNPLSDGSFANRKEVYAACLNIKS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatgaagaagataatttaggtaaagttgttcttgcagccactcctattggcaat
atgggagatgcttcatcgcgcttgattaatcttctagaaaccgcggatattgttgcagcg
gaagacacgcgcaggctttacgatcttgcaaatcgccttggcgtgcatgtttctgggcaa
gttattgcatatcacgatcacaatgagcacaataaggcagatggcttgctggacaaggtt
gagcaaggcaataccgttcttgttgtttccgacgctggtatgcctacgattaacgaccca
gggcttgcgatcgttcgccgtgcaatagagcgcgatttgcctgttacttgcgctcctggg
ccgagtgccgtactagatgctctagcgctttctggcttgccaacagaccgtttttgctac
gaaggttttttgccgcgtaaatctggagacagacagcagcatttgcgctcgcttctttca
gagcggcgaacaatcgttttttatgaggcgccgcacagaattgcggagtcaatggaagat
cttcttgcagtttttggcgcagatcgcaaaatggcgttatgtcgcgagcttacaaaggat
tttgaggaaataaggcgaggaacaatctctcaaatatgcaaaagcgtagaaaacgaccct
ccgcgcggagaaattgttcttgtgattgcgggagctagcgatgaagaaatcaagcagcga
aacattgatttgagcgttgaacagcttgcgcaaatgtcttacgatctttcgcaaaatgag
ggtttgcgtattaaagatgctataacgcgtattgtttcacaaaatcctctttcagacggt
tcttttgcgaatcgtaaagaagtttatgctgcttgtttaaacatcaagtcatga
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