Gardnerella vaginalis ATCC 14019: HMPREF0421_20290
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Entry
HMPREF0421_20290 CDS
T01344
Name
(GenBank) ABC transporter transmembrane region
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_20290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_20290
Transporters [BR:
gvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF0421_20290
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_membrane_3
DUF87
AAA_29
Zeta_toxin
AAA_16
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADP38374
UniProt:
E3D8I0
LinkDB
All DBs
Position
345900..347270
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AA seq
456 aa
AA seq
DB search
MYVNPNKRKDASNVRWVLQYCKPDMWRVGVSLVLFTINDTMAMTMPLLSGFIVDKIIIGK
QHDLLLNVCVLMVAMMIVRVGSRYIYQLLMEKFGQNAVYRLVSDEYEKLHSLDFTYFNHT
RTGDIMSRMTSDTDAIRHVLSWVSYMALDCVVMFVFALVIMFSIQWQLALALMAITPFLF
WLARLMGKNARPKFLAIRESFARMNSMVEENIEGNRVVKAFVREPFETQKFDKCNEDYFN
CNITLAKNTQKYMPWLDGMGFALELVTVGFGGWLVLNGSMTLGAFVTFNSFLWMLHMPVR
MVGWLINDWQRFNAGCVNIRKLLTQESHIDLPSASEKNVKVKGHVTFEHVDFAFPDDLDS
PVLSDIDLDVPEGTKLGILGETGSGKSTLVSLIARFYDPTRGRVLIDGKDVREWPLEIVR
NQVSIVAQETFLFSDTIAGNIGFGLPQKRGKLQRIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaaatccaaataaacgcaaagacgcgagtaacgtgcgctgggttttgcaatat
tgtaagccagatatgtggagagtaggcgtatcgctagttctttttactataaacgacaca
atggcaatgacaatgcctctactttcgggctttattgtagacaaaataattattggcaaa
cagcatgatttgcttcttaacgtatgcgtgctaatggttgcaatgatgattgttcgcgtt
ggctcaaggtatatctaccagcttctaatggaaaagtttggccaaaatgccgtgtatcgc
cttgtaagcgacgagtacgagaagctacattcgcttgattttacgtactttaatcacacg
cgcacaggcgacattatgagtcgcatgacttcggatacggatgcgattcgccacgtttta
agctgggtgtcttatatggcgcttgattgtgtagtgatgtttgtgtttgcgctagttata
atgttttcaattcaatggcagctagcgctagcacttatggcaattacgccatttttgttc
tggcttgcaagacttatgggcaagaatgctaggccaaagttccttgcgattcgcgaatcg
tttgcgcgaatgaattcaatggtagaagaaaatattgaaggcaatcgtgttgtaaaagct
tttgtgcgcgagccttttgaaacacagaaattcgataaatgcaacgaagattattttaat
tgcaatattacgcttgcaaaaaacacgcaaaaatacatgccatggcttgacggcatgggc
tttgcgctagagcttgtaacagtaggatttggcggatggcttgtgcttaacggaagcatg
actttgggcgcgtttgtaacgtttaacagttttctttggatgctccacatgccagtaaga
atggttgggtggcttattaacgattggcagcgattcaacgcaggatgcgtaaatattcgt
aagcttctcacgcaagaatcgcatattgatttgccatctgcctccgagaaaaacgttaag
gtaaagggccatgtaacttttgaacacgttgattttgcgttcccagatgatcttgattcc
ccagttttaagcgatattgatttagatgttccagaaggaacaaagcttggaatcttaggg
gaaacggggtctggaaagtcaacgcttgtaagtcttatagcaagattctatgatcctacg
cgcggccgcgttttaattgatggaaaagacgtgcgcgaatggcctttagaaattgttaga
aatcaagttagcatagttgcgcaagaaacatttctgttttccgatacgattgcaggaaat
attggctttgggttgcctcaaaaacgaggaaaattgcaaagaattagataa
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