Gardnerella vaginalis ATCC 14019: HMPREF0421_20374
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Entry
HMPREF0421_20374 CDS
T01344
Symbol
araA
Name
(GenBank) L-arabinose isomerase
KO
K01804
L-arabinose isomerase [EC:
5.3.1.4
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00040
Pentose and glucuronate interconversions
gvg00052
Galactose metabolism
gvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HMPREF0421_20374 (araA)
00052 Galactose metabolism
HMPREF0421_20374 (araA)
Enzymes [BR:
gvg01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.4 L-arabinose isomerase
HMPREF0421_20374 (araA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AraA_N
Arabinose_Iso_C
AraA_central
NYN_YacP
LZ3wCH
Motif
Other DBs
NCBI-ProteinID:
ADP38456
UniProt:
E3D8R2
LinkDB
All DBs
Position
451981..453495
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AA seq
504 aa
AA seq
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MAMENPFENKEVWFAVGSQELYGPETLEQVAKQAGEIVDYLNNQHSIPVKIVLKPTLKSS
DAVRNFMVDASSKESCIGVIAWMHTFSPAKMWIRGLELLRKPLLQLNTQYHREIPWESID
MDFMNLNQAAHGDREFGYIVSRLGIRRKIVVGHYTNPEVSDRINTWVRACLGWWASNNMN
VMRWGDNMRNVAVTEGDKTEAEKIFGASINTWSVNELNSYVNRATDKQAKDLIEDYKNKY
NIDPELLNQKYDSLLIAAKQEVGMVSMMCDYDATAAVDNFEDLGGLSQLPGVAAQRFPSE
YGWGFSAEGDWKTAILVRLGLVMGYGLEGGASLMEDYSYHFEPDNEMILGSHMLEVSPSI
GSIQKPRLAIYPLGIGGKSDPVRLVFTAAPKKDAVVVSLADMCSRFRLLMNIVDVVEPSG
SLKNLPCARAMWKPQPSLSLSAQCWLLAGGSHHTCMTTSIGREVWEDFARISGVELAVID
KNTNTQDFERNLQISQMYYKLNVK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaaaatccttttgagaacaaagaagtgtggtttgctgtaggttcgcaagaa
ctatatggtccagaaacactagaacaagtggcaaaacaagctggcgaaatcgtagattat
ttaaataatcaacattcgatacctgtgaaaattgttttgaaaccaaccttaaaatcatct
gacgctgtgcgtaattttatggttgatgcgtcttcaaaagaatcttgtatcggtgttatt
gcttggatgcacacgttctcgccagcaaaaatgtggattcgcggattagaactgttgcgt
aaacctttgcttcagttgaatacccagtatcatcgtgaaataccttgggaaagtattgat
atggattttatgaatttaaatcaagctgctcatggagatagagaattcggttatattgtt
tctagacttggtattagaagaaaaatagttgttggtcattatacgaatccagaagtttcg
gatcgcataaatacttgggttcgtgcgtgtttaggctggtgggcgtctaacaatatgaac
gttatgcgttggggagacaatatgcgtaacgttgctgttactgaaggagataaaactgaa
gctgagaaaatctttggtgcatctattaatacttggtctgtaaacgaattaaattcatat
gttaatcgtgctacagataagcaagctaaagatttgatagaagattataaaaataaatac
aatattgatccagaattattaaatcaaaaatatgattctctgttaattgcagctaagcag
gaagttggaatggtatccatgatgtgtgattatgatgctactgctgcagtagataatttt
gaagatcttggtggtctttcccaacttccaggagttgctgctcaacgttttccttccgaa
tatggatggggtttctcggcagaaggggattggaaaaccgcaatattggttcgtttggga
ttagttatggggtatggtcttgaaggtggagcttctcttatggaagattactcgtatcat
tttgagccagataacgaaatgatattaggatcacatatgttagaagtttcgccttctatt
ggaagtattcaaaaacctcgtcttgctatatatccattgggtattggaggaaaatcagat
cctgttagactcgtgtttactgctgctcctaaaaaggatgctgttgtggtttctcttgcg
gatatgtgcagtagatttagacttttaatgaatattgtcgatgttgtagagccgtctgga
agcctaaagaatttgccttgcgctcgcgccatgtggaaaccgcagccaagtctatctttg
tctgcgcaatgctggttattagctggtggatcccatcatacttgtatgacaacgtcaatt
ggtagagaagtttgggaagattttgcgcgtatctctggtgtcgaactagctgtgattgat
aaaaacactaatacccaagattttgagcgcaatctacagatttctcaaatgtattacaag
cttaatgttaagtaa
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