KEGG   Gardnerella vaginalis ATCC 14019: HMPREF0421_20431
Entry
HMPREF0421_20431  CDS       T01344                                 
Symbol
def
Name
(GenBank) peptide deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
gvg  Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:gvg00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    HMPREF0421_20431 (def)
Enzymes [BR:gvg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     HMPREF0421_20431 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ADP38513
UniProt: E3D8X2
LinkDB
Position
521687..522340
AA seq 217 aa
MFTHHASVDTKLSRAVERLLDSATDDGVLSIVQAGEPVLRQRTVAYDGQLTRATLNKLIS
LMHSTMLDAPGVGLAAPQIGLGLAIAVVEDHVRDDADDPRDIAELPFRAIINPHYEPIGT
QTRSFYEGCLSVAGYQAVRQRWLDIQATWQDEDGKQHSERLHGWPARIFQHETDHLRGEL
YIDRAEMRSLSTDENLEDYWADEAVPVTAARTLGFAI
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtttacgcatcacgcaagtgttgatactaagcttagccgcgcggtggagcgcctttta
gattccgctacagacgatggcgtgctatctatagttcaagcaggagagcctgtgttaaga
caacgaacagtggcttacgatggtcagctaacgcgtgctactcttaataagcttatttcg
cttatgcacagcactatgttagatgcaccaggagttggcttagctgctccgcaaattggt
ttaggtcttgcaattgctgttgtagaagaccatgttcgagacgatgcagatgatcctagg
gatattgcagaattgccatttagggcgatcataaatccccactatgaaccaattggaaca
caaacacgcagtttttacgaaggatgcttgagtgttgcaggatatcaggcggttcgtcag
cgttggttagatattcaagctacatggcaagatgaagatggtaagcagcattctgaacgt
ttacatggttggccagcgcgaatcttccagcatgaaacagatcatttacgcggagagctt
tatattgatcgtgctgagatgcgctcgctttctacagatgaaaatcttgaggattattgg
gctgatgaggctgttcctgtaactgctgctagaacactcggttttgcgatttaa

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