Gardnerella vaginalis ATCC 14019: HMPREF0421_20456
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Entry
HMPREF0421_20456 CDS
T01344
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00260
Glycine, serine and threonine metabolism
gvg00270
Cysteine and methionine metabolism
gvg01100
Metabolic pathways
gvg01110
Biosynthesis of secondary metabolites
gvg01200
Carbon metabolism
gvg01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMPREF0421_20456
00270 Cysteine and methionine metabolism
HMPREF0421_20456
Enzymes [BR:
gvg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
HMPREF0421_20456
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Motif
Pfam:
SDH_alpha
SDH_beta
CdAMP_rec
Motif
Other DBs
NCBI-ProteinID:
ADP38538
UniProt:
E3D8Z4
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All DBs
Position
558212..559696
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AA seq
494 aa
AA seq
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MFSIGVGPSSSHTVGPMRAANAFVTSLKESGKLNNVARVHVTLYGSLSLTGLGHGTDRAS
VAGLEGNLPDDVDTEHMMTIREYCKKTGTLTLAHSHTIEFDYDSDVIFEKWKRMVAHPNG
MRFVAFDSQGNTVDEQVWYSIGGGFIRKGNANDAMVGLHDRVLDDANNVDDSKSDSTNNS
VNGDSSVNSSNDSTVPYPFSTCKELISICKKEHKNISDIVWQNELALHEGDAHYVRSYLL
HVWKVMSKCVENGCNSKQEILPGGLDVPRRAPNMYARLAANSDMLRQNHRRADSALESSD
SAWVNLFALAVSEENAGGGRIVTAPTNGSAGIIPAVLQYYWRFVDSASEDGIVRFLLASG
AVGYLFKRNASISGAEVGCQGEVGSACSMAAAGLCEVLGGTPEQVENAAEIGIEHHLGLT
CDPVGGLVQIPCIERNAMAANTAINAVRIALLGDGSHIVSLDNAIKTMKETGQDMMSKYR
ETSKGGLAVNVVEC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgattggtgtaggacctagttcttctcatactgttggtcctatgcgcgctgcg
aacgcttttgttacttctttgaaggaaagtggaaagcttaataatgttgcgcgagttcat
gttacattgtacggttctttgtctcttacaggtttaggtcatggcacggatcgtgcttct
gttgcaggtttggagggtaatttacctgacgatgttgatacagaacacatgatgactatt
cgcgaatattgtaagaaaactggtactttgactcttgctcatagtcatactattgaattt
gattacgattcagacgtgatttttgaaaagtggaagcgcatggttgcacaccctaatggc
atgaggtttgtggcttttgattctcaaggtaatactgttgacgagcaagtttggtattca
attggaggtggttttattcgcaaaggtaacgcgaatgatgcaatggttgggttgcatgat
cgcgttttagacgatgcgaataatgttgatgattctaagtctgactcgacaaataattct
gtaaatggcgattcttccgtaaattcttccaatgattcaactgttccttatcctttctcg
acttgtaaagagcttatttcaatttgcaaaaaagaacataagaatataagtgatattgtt
tggcaaaatgagcttgctttgcatgagggagatgcgcattacgttcgctcctatttgcta
catgtgtggaaggttatgagcaagtgtgtggaaaatggttgtaattctaaacaggagatt
ctccctggaggacttgatgttcctaggcgtgctcccaatatgtatgctcgtcttgctgct
aattcagatatgcttcgtcagaatcatcgtagggctgattcagctttagaaagctccgat
tctgcgtgggttaatctttttgcacttgctgtgagtgaggagaatgctggtggtggtcgt
attgttacggctcctactaatggttctgccggaattattccagctgttttgcaatattat
tggcggtttgtagatagtgctagtgaagatggaattgtaagattccttcttgcttctggc
gctgttggatacctgtttaaacgcaatgcttcgatttctggtgcagaagttggatgccag
ggagaagttggttccgcgtgttctatggctgctgctggattatgtgaggtgcttggcggc
actcctgaacaggttgaaaatgctgcggaaattggtattgagcatcatcttggtttgact
tgtgatcctgttggcggtttggtgcagattccttgcattgagcgcaatgctatggctgct
aatacggcgattaatgctgtgagaattgctctgctaggtgatggttcgcatattgttagc
cttgataatgcgattaaaacaatgaaggaaactggtcaagatatgatgtctaagtacagg
gaaacatctaaaggtggactcgccgtaaacgttgttgaatgttag
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