Gardnerella vaginalis ATCC 14019: HMPREF0421_20503
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Entry
HMPREF0421_20503 CDS
T01344
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0421_20503 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gvg03400
]
HMPREF0421_20503 (recO)
DNA repair and recombination proteins [BR:
gvg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0421_20503 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HMPREF0421_20503 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
ADP38585
UniProt:
E3D941
LinkDB
All DBs
Position
625445..626188
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AA seq
247 aa
AA seq
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MIFMPLYNDEAVVLKTFPLGEADRIVVMLTKKHGKIRAVAKGVRKIKSRFGARLEPFMRV
NALFATGRTFDVVSQAVLVSAYAESICADYDLYSRASMIAEIADDLVSSSAQYQDSCMQY
NLLVAALSALSRGLHSADSIGFSYVLRALKLAGWSPMLNECVVCATKDDLSYFSSCSGGV
MCSKDHDLQSIKCNGLARFQMISLINGDWKNIDGTDIDYLTYRCVEQWCEYYLERPIKSM
HLLENNM
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgattttcatgccgttgtataacgatgaggctgtagttcttaagacttttcctttagga
gaagcggatagaattgtagttatgcttactaaaaagcatggtaagattcgtgctgttgca
aaaggtgttaggaaaataaaatctcgttttggggcgcgtttagaaccttttatgcgtgtg
aatgcactttttgctactggaagaacttttgatgttgtttctcaagcggttttagtttct
gcttatgctgagagtatttgtgctgattatgatttgtatagtcgtgctagcatgattgcg
gaaatcgcagatgatttggtttcgtcttctgcacagtatcaggattcttgtatgcaatac
aatctgcttgttgcagccttatctgctctttctaggggattgcatagtgctgattcaatt
ggattctcatatgttttaagagcgttaaaactagctggctggtctcctatgcttaatgaa
tgcgtagtttgtgcaactaaagatgatttatcatatttttcctcttgttctggaggagtt
atgtgttctaaagatcatgatttgcagtcaattaagtgtaatggtttagcacgttttcaa
atgatttctttgattaatggcgattggaagaatatagacggaacagatattgattattta
acgtatagatgcgttgagcagtggtgtgaatattatcttgagcgtccaattaaatcaatg
catttattagaaaataatatgtga
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