Gardnerella vaginalis ATCC 14019: HMPREF0421_20593
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Entry
HMPREF0421_20593 CDS
T01344
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvg03009
]
HMPREF0421_20593 (rrmJ)
Enzymes [BR:
gvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HMPREF0421_20593 (rrmJ)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HMPREF0421_20593 (rrmJ)
Ribosome biogenesis [BR:
gvg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF0421_20593 (rrmJ)
23S rRNA modification factors
HMPREF0421_20593 (rrmJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_23
SYY_C-terminal
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ADP38675
UniProt:
E3D9D1
LinkDB
All DBs
Position
736525..737304
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AA seq
259 aa
AA seq
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MSDGDDLVQRLDCELVNRGLVKSRTTAQRLIKSGLVKVDNRIVYKSSFLVEKAQEISFDE
SKKENSCLKYVSRGALKLEGAFSLFEDLGLKVYSNTKALDIGASTGGFCDYLLQNGVNRV
IALDVGHGQLHPKIASDPRVIEMSGVNIRDVYAQDLPYKPNLIVSDVSFISLTFVIPVIA
RIAQNNANIVLLVKPQFEVGKGNLGKGGIVTDKDLRLKALENIKECAKNSGLKVVSTHES
PIEGTHGNIEYLLYARFNS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggagatgatttagttcagcgattagattgtgaacttgtaaatcgcggatta
gtgaaaagtagaacgacagctcagcgtttaattaagtctgggttagtaaaagtagataat
cgaattgtttataaatcatcatttttagtggaaaaagcgcaagaaataagttttgatgaa
tcaaaaaaagaaaattcttgtcttaaatatgtttctagaggagcactcaaattagaaggt
gcgttctctttatttgaagatttaggattaaaagtttattcaaatactaaagcgctagat
attggtgcttcaactggcggtttttgcgattatttgttgcaaaatggcgttaatcgcgtt
attgctttagacgttggacacggtcaattgcacccaaagatcgcaagcgatccgcgcgtt
atcgaaatgagtggcgtaaatattagagatgtttacgcgcaagatctgccttacaagcct
aatcttatagtctcagatgtttcttttatatctcttacttttgttattccagtaatcgcg
cgtattgcgcaaaacaacgcgaatattgttcttcttgtaaagccacaatttgaagttggt
aaaggaaatcttggaaaaggcggaattgtaacagataaagacctaagacttaaagcatta
gaaaatattaaagaatgcgctaaaaatagtggtttaaaagttgtttcaactcatgaatct
cctatagaaggaactcatggaaatattgaatatcttctttatgcgcgatttaatagttaa
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