Gardnerella vaginalis ATCC 14019: HMPREF0421_20608
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Entry
HMPREF0421_20608 CDS
T01344
Name
(GenBank) repeat protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_new
Trypan_PARP
Gram_pos_anchor
IrmA
Motif
Other DBs
NCBI-ProteinID:
ADP38690
UniProt:
E3D9E6
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Position
755467..757644
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AA seq
725 aa
AA seq
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MNKKTVILLSTTMMSIATAACAFCMAQTANAADTYVDFGTSTAKVTTPPQLKIALLKKTN
SSETNGIKSSDPSDSSDKDNIKPETNSKPNSNTKTESKLETKSNVKSSIKLSANTNVNSV
VETTTKSNADSVVNTDTKTELNIYSKSKGEEAPVSPTIFNQALFASGKPAPNQTPKPQTQ
TTELKVSLCWETMNKDNKNAFIKSDSDFGQLNFENWDFGSTLDSSRKDVKDAFKNIQFQI
KDTTDNKVVATTTGTYDPYTATSATKSLGSYDSSHTYEVSVVNSTVPSPYYVTYNNVATD
ESQSFEPDVTHFTWNPSKGSNKNYQNKYFRLNALEIVYAKDESVADKCFSYEQPKKDDGN
YRSDGNWNFKYNKDNIFERIRVKDNAIQFPTDENGKPKVPVKAGYKFVGWQFYVAKKTDN
RPYTSFDRMSDDDKKIINSTTVAYSDFGTKPFIDYPYIFALIRDNKGVNTFGSKLGTQYC
STNHTFVVFPKWEVAGHTVTFMDGDTQYAQVKVQDNKSISGDEWTDQSMPANPTKAGFTF
NGWYQDKNGTGDVFTGDTVVANSDMTVYASYVKETSPTPSPAPTPSPAPEPTPTPAPVPE
PKPEPTPTPEPEPDVTPEPEQKPVPDVPYVPDDSWIPLPEIVPENPRYSVVEQPVLNPVH
SSDKPVGHSVEQRFKAVDAGEAYSAKSPAKHLPDTGVSLVMSISTLFVSLFAGFGLSMFK
SRRKH
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaactgtgattttattatcgactacgatgatgagtattgctactgctgct
tgcgctttttgcatggctcaaactgcaaatgctgctgatacttacgtggattttggcact
tcaactgcaaaagttactacccccccccaattgaaaatagctcttctcaaaaaaaccaat
tcttctgagacaaatggcataaagtcttctgatccttctgattcttctgataaagataat
ataaaacctgaaacgaattcgaaaccaaattctaatacaaagactgaatccaagcttgag
actaagagtaatgtaaagtctagtatcaagctttctgcaaatactaatgtaaattctgta
gttgagactactactaaatctaatgcagattctgttgtaaatactgatacaaagactgaa
ttaaatatttattcaaagtctaagggtgaggaagctccagtttcaccaacaatttttaat
caagcgctttttgctagtggtaagccagctcctaatcaaactcctaaacctcaaacacaa
acgactgagcttaaggtaagtctttgctgggaaaccatgaacaaagataataaaaatgca
tttattaagagcgatagcgattttggtcaattgaattttgagaattgggactttggttcc
acgctagattcttctaggaaagacgtaaaggacgcgtttaagaatatccagtttcagata
aaagatacaactgataacaaggtagtagcaacaactactggaacttatgatccttatact
gctactagtgcaaccaaaagcttgggtagttatgattcaagccatacttatgaagtgtca
gtggtaaacagcacagttccaagcccgtattatgtgacgtataacaatgttgccacagat
gaatcacaatcgtttgaacctgatgtcacgcactttacgtggaatccatctaaagggtct
aataaaaactatcaaaataaatattttcgtctaaatgccttggagattgtttatgcgaag
gatgagtctgtggcagacaagtgcttctcgtatgagcagccaaaaaaggatgacggaaac
tatcgatctgatggtaactggaatttcaagtataacaaggataatatttttgagcgtatt
cgtgtaaaagataatgctattcagttcccaacggatgaaaatggcaaacctaaggttcct
gttaaagctggttacaagtttgttggttggcagttctatgttgctaaaaaaacagataat
cgtccatacacgtcgtttgaccgtatgagtgatgacgataaaaagatcattaatagtaca
actgttgcgtattcggattttggtactaagccatttattgattatccgtatatttttgcg
ctgataagggataacaagggcgttaatacatttggcagtaaactcggtacgcagtattgc
tctacaaatcacacatttgttgtattccctaagtgggaggttgctggtcatacagttact
tttatggatggagatactcaatatgcacaagtaaaagtgcaagacaataagtctattagt
ggtgatgaatggactgaccagtctatgcctgctaatcctactaaagctggttttactttt
aatggttggtatcaggataaaaatggaactggggatgtgtttactggtgatactgttgta
gctaatagtgatatgactgtatatgcgtcgtatgtaaaagaaacatctcctacaccatct
cctgcacctacgccatctccagctcctgaaccaacaccaacaccggctccagttcctgag
ccgaaaccagagccaaccccaactccagaacctgagccagatgtgactcctgaacctgag
cagaagcctgttcctgatgttccttatgtgcctgacgattcgtggattcctcttcctgag
attgttcctgagaatccaaggtattctgttgttgagcagcctgtgttgaatcctgttcat
tcttcggataagccagttgggcattctgttgagcagcgttttaaggctgttgatgctggt
gaggcttatagtgctaagtctcctgctaagcatttgcctgatactggtgtttcactggtt
atgtctataagtactttgtttgtgtctttgtttgctggttttggtttgtctatgttcaag
tctcgccgcaagcattaa
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