KEGG   Gardnerella vaginalis ATCC 14019: HMPREF0421_20673
Entry
HMPREF0421_20673  CDS       T01344                                 
Symbol
casC
Name
(GenBank) CRISPR system CASCADE complex protein CasC
  KO
K19124  CRISPR system Cascade subunit CasC
Organism
gvg  Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:gvg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gvg02048]
    HMPREF0421_20673 (casC)
Prokaryotic defense system [BR:gvg02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    HMPREF0421_20673 (casC)
SSDB
Motif
Pfam: Cas_CT1975
Other DBs
NCBI-ProteinID: ADP38755
UniProt: E3D9L1
LinkDB
Position
831581..832669
AA seq 362 aa
MNAHLFLDIQAIQTVPPCNINRDDAGSPKTAQYGGVTRTRISSQCWKHSMREYFKEHSGD
SNVGIRSKNIVKYVADKIITLKPELSEQEALDLADKTLNTAGVKTKTDKGETVPTAKALF
FLGETQANSLAQAAINNVTDKKQLQEILRDNPPIDIALFGRMLADDPSLNEDASSQVAHA
ISTHAVRTEFDYYTAVDDLSADDNAGAGMLGTIEYNSSTLYRYANVAVHEFSHQLSDNKE
STINALRLFIEAFANAMPTGKVNTFANQTLPQMLVVTLRDDRPVNLVSAFEDPVKSKDGY
VSKSIEKLSQEYEKVQKFVHKPLASFYVTMDSSNEEIKLGVEEQSMQQLLDDFSSKVSEF
LQ
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaacgctcatttattcttagatattcaagcaatccaaactgttccaccatgcaatatt
aatcgcgatgatgcaggcagtccaaaaactgctcaatatggcggtgtaactagaaccaga
ataagttctcaatgctggaagcactcaatgcgtgaatacttcaaagagcacagcggtgat
tctaatgttggaatacgaagcaaaaatattgttaaatacgttgccgataaaatcattacg
ttaaaaccagaattatctgaacaagaagcattagatttagcagataaaacgttaaatact
gctggagttaaaactaaaacagataagggggaaacagttcctacagcaaaagctttattc
ttcttaggcgagactcaagcaaattctctagctcaagcagcaatcaataatgttactgac
aagaagcaactgcaagaaatcttgagagataatccacctattgatattgcgttattcggt
cgcatgcttgcagacgatccatcgcttaatgaggacgcttcttcgcaagttgctcacgca
atttccactcacgctgttcgtactgaattcgattactatactgctgttgatgatttatct
gcggatgataatgctggagctggaatgcttggaacaatagaatataattcttcaacgctg
tatcgttatgcaaatgttgcagtacatgaatttagccatcagttgagcgataacaaagaa
tctacaattaatgctcttagactttttattgaagctttcgctaacgcaatgcctactggc
aaagtaaatacttttgctaatcaaactttgccgcaaatgctggtggtaactttaagagat
gacaggccagtgaacttagttagtgcatttgaagatccagtaaaatctaaggacggatat
gtttcaaaatctatagaaaagctatctcaagaatacgaaaaagttcaaaaatttgtccat
aaaccacttgcatcattctatgtaacaatggattcttcgaatgaggaaattaaattaggc
gtggaagagcaaagtatgcagcaattgttggatgacttttcttctaaagtctccgaattc
cttcagtaa

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