Gardnerella vaginalis ATCC 14019: HMPREF0421_20691
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Entry
HMPREF0421_20691 CDS
T01344
Name
(GenBank) putative dihydrodipicolinate synthase
KO
K22397
2-dehydro-3-deoxy-D-pentonate aldolase [EC:
4.1.2.28
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00040
Pentose and glucuronate interconversions
gvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HMPREF0421_20691
Enzymes [BR:
gvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.28 2-dehydro-3-deoxy-D-pentonate aldolase
HMPREF0421_20691
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Motif
Pfam:
DHDPS
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADP38773
UniProt:
E3D9M9
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All DBs
Position
complement(849476..850390)
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AA seq
304 aa
AA seq
DB search
MITSSIAKLDLHAFKGVFCPSITVSKDDGSIDYNLWAKHLDHLIDAGINGILIFGSIGEF
YAYPLSIKKEAAKFAIEHVNHRVPVLIGVGNTNLNEVLDFTKFAESCGADAVVAVSPYYF
GPTAPTAERYFGAIANATSLPVILYNFPARTGSDLTPSLVASLAEKYPNIVGIKDTVDTI
SHTRAMIEATRRVNPDFVVFSGFDEYYTPNRIAGGNGVICGLTNVEPETFASLHKAYEAG
DFAHLIECAKRISHLMAVYNTTDLFISAIKAAVNLKGLPISTLVREPASQVNSEQIEAIR
ALLK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgattacttctagtatcgcaaagcttgatttgcatgcttttaagggcgttttctgccca
tcaataactgtaagcaaagatgacggaagcattgactacaacttatgggcaaagcactta
gaccatctgattgatgctgggattaatggcatattgatttttggcagcatcggcgaattc
tacgcatatccacttagcataaaaaaggaagctgctaagtttgctattgaacatgttaat
cacagagttccagttcttataggcgttggaaacacaaatcttaacgaagtacttgacttt
actaagtttgcggaaagttgcggagcagacgctgttgtagctgtatctccatactacttt
ggaccaactgcaccaactgccgaacgatactttggcgcaatagctaacgcaactagcttg
cccgttattctatacaacttccctgctcgaactggcagcgatttaacaccaagcttagtt
gcaagtcttgctgaaaaatacccgaatattgttggtattaaagatacggtagatactata
agccatactcgcgcaatgattgaagccactagacgcgtaaacccagatttcgttgttttc
tctggctttgatgagtattacactcctaacaggattgctggaggaaacggcgtgatttgt
ggtcttacaaatgtagagccagaaacttttgcatctttgcataaggcgtatgaggctggc
gattttgcacatcttattgaatgtgctaaaagaatcagccatttgatggcagtttacaac
actaccgacttgtttatttctgctattaaagctgctgtaaatcttaagggattgccgatt
agcacgcttgttcgcgagcctgcaagtcaagttaatagcgagcaaatcgaagcaattcgt
gcgctgcttaagtaa
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