Gardnerella vaginalis ATCC 14019: HMPREF0421_20761
Help
Entry
HMPREF0421_20761 CDS
T01344
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0421_20761 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gvg03021
]
HMPREF0421_20761 (rpoZ)
03400 DNA repair and recombination proteins [BR:
gvg03400
]
HMPREF0421_20761 (rpoZ)
Enzymes [BR:
gvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0421_20761 (rpoZ)
Transcription machinery [BR:
gvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0421_20761 (rpoZ)
DNA repair and recombination proteins [BR:
gvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0421_20761 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADP38843
UniProt:
E3D9U9
LinkDB
All DBs
Position
939834..940130
Genome browser
AA seq
98 aa
AA seq
DB search
MENIMALGTKPTPTGLANPPIDDLMQHADSKYALALFAAKRARQINSYFTQLNEGLLQNV
GPLVDYRNQEKPLSIAFREINKGLLVENLGEDDMNEGN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggagaacattatggcattgggcactaagccaacacctacgggacttgcaaatccgcct
attgatgatttgatgcagcatgcggattccaagtatgcgcttgccttgtttgccgcaaaa
cgagcacggcagattaattcttatttcactcagctcaacgaaggattgttgcagaatgtc
ggtcctcttgttgattatagaaaccaagagaagcctctttctatagcattccgagaaatt
aataaaggtttgctggtggagaatcttggtgaagatgatatgaatgagggaaattaa
DBGET
integrated database retrieval system
