Gardnerella vaginalis ATCC 14019: HMPREF0421_20765
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Entry
HMPREF0421_20765 CDS
T01344
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvg03019
]
HMPREF0421_20765
Messenger RNA biogenesis [BR:
gvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMPREF0421_20765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
CoaE
Motif
Other DBs
NCBI-ProteinID:
ADP38847
UniProt:
E3D9V3
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All DBs
Position
945114..946013
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AA seq
299 aa
AA seq
DB search
MITENSEFSQVASDFEVMLITGMSGAGRSHAANALEDMGWYVIDNLPPKLLIPLVDMMTS
SGSKVHKLAAVIDVRSRGYFDDLFVVLGHIDDLGVKTRILFLDASDSVLIKRYESVRRPH
PLQRGGRLIDGILEERELLCHLKDCADIIIDTSNLSIHQLSTKLYEGLLGKGSSTVSVHI
FSFGFKYGMPMDADFVADMRFLPNPFWIPELRDLTGKDKAVSDYVLKNPAAIEFLDYYEK
ALLTAIDGFAKEDKHYVTIAVGCTGGQHRSVAISIELARRLKLRGLQVTVSAREMRSRT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgaaaatagtgaattctcgcaggtggcaagcgattttgaagtaatgctcatt
actggcatgagcggcgctggcagatctcatgcagcaaatgctttggaagacatgggctgg
tatgttattgataatcttcctccaaagttactcatccctcttgtagacatgatgacatct
tctggatctaaagttcataagcttgcagcagttattgacgtaagatcacgcggatatttt
gatgatttatttgttgttttgggtcatatagatgatttaggcgtaaaaactcgaatacta
tttttagatgcatctgattctgtgctcattaaaagatatgagtcagtgcgcagaccacat
cctttgcagcgcggaggaagacttatagatggtattttggaagagcgtgagcttttatgt
catcttaaagattgcgcagatattattatcgatacttcaaatcttagtattcatcagctt
tccactaaactttatgaggggttgcttggaaaaggatcttctacagtatctgttcacatt
tttagttttgggttcaagtacggaatgcctatggacgccgattttgtggcagatatgcga
tttttgcccaatccattttggattccagagcttagggatttaactggaaaagataaagca
gttagcgattatgttcttaaaaatccagcggcaatagaattcttagactattacgaaaaa
gctcttcttacggcaattgatggttttgcaaaagaagataagcattatgtaacaattgct
gttggatgcactgggggtcagcataggtctgtagctattagcatagagcttgcaagaaga
ctaaaattaagaggattgcaggttacagtatctgctagagagatgagatctagaacatga
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