Gardnerella vaginalis ATCC 14019: HMPREF0421_20800
Help
Entry
HMPREF0421_20800 CDS
T01344
Name
(GenBank) ABC transporter, ATP-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_tran_Xtn
AAA_16
AAA_18
MMR_HSR1
AAA_29
ATP-synt_ab
AAA_23
Arf
AAA_22
RsgA_GTPase
PduV-EutP
TsaE
nSTAND3
AAA_30
SRP54
TPR_1
CAP12-PCTIR_TIR
Zeta_toxin
MeaB
Motif
Other DBs
NCBI-ProteinID:
ADP38882
UniProt:
E3D9Y8
LinkDB
All DBs
Position
complement(978371..979972)
Genome browser
AA seq
533 aa
AA seq
DB search
MAIDAQGLTIQIGARTLLNPTDFHVTKGDKIGLVGRNGAGKTTLTRVITGEMLPAGGTVR
VSGGLGYLPQDTHAADPEQSALDRIMSARDISSIVSRIRKAEKEMTNPDPDIMTKAMNRY
DKAIEDFEKAGGYAVQSEAISMANSLGLPQEIMKQALGTLSGGQRRRIELARILFSDADT
LILDEPTNHLDADSIIWLRNYLKKFSGGFLVISHSTELLDEVVNKVWHLDAQLAQIDMYS
MGWKAYLHQRVVDEERRRREREVAEKKAERLMKQGIRLHAKATKAVAAQNMMRRAERLLS
ETSEAQSREKVADIRFPEPAPCGRTPIMAEDISKAYGSNIVFAGINLAIDKGSRVVILGY
NGAGKTTTLRILAGEESADTGSVNYGHGCKIGYFAQEHDTLDLDATVLENLQHVAPDLND
TQARSMLGSFLFSGDDAMKPAKVLSGGEKTRLALATLVTSKANVLLLDEPTNNLDPASRD
EILKAIAKYEGAIVLVTHDEGAVLALNPERVLLMPDGDEDLWSDDYLDLVAEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggccattgacgcacaaggacttactatacaaattggtgcgcgcacgctattaaaccca
acagattttcacgttacaaaaggcgacaaaatcggcttagttggaaggaatggagctgga
aaaacaactcttacacgagtaataacaggagaaatgctccctgctggcggaactgtacga
gtaagtggtggattggggtatctaccacaagatactcatgcagcagacccagaacaaagc
gcgttagatagaatcatgagcgctcgcgacatttcgtcaattgtatctcgtatacgaaaa
gcagaaaaagagatgacgaatccagatccagatattatgacgaaagccatgaatcgctac
gacaaagccattgaagactttgaaaaagctggtggatatgctgttcaatcggaagcaata
tcgatggcaaacagccttgggcttccacaagaaattatgaagcaagctcttggaacacta
tctggcggtcaacgtagacgaattgaacttgcacgaatacttttctccgatgcagacacg
ctgattttagatgagcctactaaccatttagatgcagattctataatttggctgagaaac
tatttgaaaaaattctctggtggattcttagtaatatcccattcaacagaattgctagat
gaggttgtaaataaagtctggcatttagatgcacaattggctcaaatagacatgtattca
atgggttggaaagcatacttacatcaacgcgttgtagacgaagaacgcaggcgcagagaa
cgagaagtggctgaaaaaaaagctgaacgccttatgaaacaaggtattcgtttacatgca
aaagcaacaaaagcagtagcagctcaaaacatgatgcgtagggctgaacgtctgttaagt
gaaacaagcgaagcacaaagtcgcgagaaagtagcagatattcgttttccagaacctgct
ccttgcggacgaacacctattatggctgaagatatttcaaaagcttatggatccaatatt
gtatttgctggcataaatttggctatagataaaggttcaagagttgttattcttggatat
aacggtgctggtaaaacaaccactttacgtattctagctggagaagaaagtgcagatact
ggcagcgtaaactatgggcatggctgcaagattggctattttgctcaggaacacgacact
ttggatttagatgcgacagtattagaaaatcttcagcatgttgctccagatttaaatgac
actcaagcaagatctatgctaggaagcttcctattttctggagatgacgcaatgaagcca
gctaaagtgctttcgggaggcgaaaaaactcgtctagccttggcaactcttgtaacttca
aaagcaaacgtgcttttgctcgatgagcctactaacaatttagatccagcttctagagat
gaaattcttaaagccattgcaaaatacgaaggcgctattgtattggttactcacgatgaa
ggagcagttcttgcgttaaaccctgaacgagtccttcttatgccagacggtgacgaagat
ttgtggagtgatgattatcttgatttggttgcggaagaatag
DBGET
integrated database retrieval system
