Gardnerella vaginalis ATCC 14019: HMPREF0421_20848
Help
Entry
HMPREF0421_20848 CDS
T01344
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvg03009
]
HMPREF0421_20848 (der)
Ribosome biogenesis [BR:
gvg03009
]
Prokaryotic type
GTPases
HMPREF0421_20848 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
Cytidylate_kin
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AAA_18
Ras
Roc
AAA_28
AIG1
ABC_tran
AAA_22
AAA
NB-ARC
SpoIVA_ATPase
AAA_17
Ploopntkinase3
Arf
ATP_bind_1
MeaB
ADK
URGCP_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADP38930
UniProt:
E3DA36
LinkDB
All DBs
Position
complement(1039292..1041496)
Genome browser
AA seq
734 aa
AA seq
DB search
MICVAIDGPAGVGKSSTSRALAQYYGFAYLDTGAMYRAAAWWCLKQGIDLSKQLELDEEG
NSTNSADAKRLNQIVEAVGALFTEDHAEFSVDPKNPVVVIDSEDISEELRSSEVSSHVST
VSSIPAVRRMLIAAQRAYIASESSEDSFSGGEGIVAEGRDITTVVAPNAQVRVLLTAREE
VRQARRNKQDIEQENLQNNESKNNESEEDDIRARDAKDAKVTNFLKAADGVTTLDNSDLT
FEQTLDALVEIVDDAIEQDEYDRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGVI
AVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGWEADVE
GIDSSIAQQAQVAVRLSDAVIFLVDGQVGLTATDERIVSMLRAAGKPITLAVNKVDDARS
EYLTAEFWKLGMGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFLTPEGLRRVALVGR
PNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRVDGEDWLFIDTAGIKRRQHKLTGA
EYYSSLRTQAAIERSELALILFDSSQPIAEQDLKVMSQAVDAGRAIVLVFNKWDLMDEFS
RQRMERLWKTEFERVTWAERVNLSAKTGWHTNRLARAMRTALDSWDKRIPTGKLNAFLGR
IQSAHPHPLRGGKQARILFATQASTRPPRFVIFATGFLEHGYRRFIERSLREEFGFEGTP
IQISVKVRDKKKRK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgatttgcgtagcaattgatggaccagcaggagtaggtaaatcttctacttctcgtgct
ttagcgcaatactatggttttgcgtatttagatacgggggcaatgtatcgagctgctgct
tggtggtgcttgaagcaaggtattgatttaagcaagcagcttgagttggatgaagaagga
aattcaacgaattctgcagatgcaaaacgcttgaatcaaattgttgaagctgttggagca
ttgtttacggaagatcatgctgaatttagtgttgatccaaaaaatcctgtagtcgtaatt
gatagtgaagatattagcgaagaattgcgttccagcgaagtttcttcgcacgtgtctacg
gtttcttcgattcctgcagttcgacgcatgcttattgctgctcagcgcgcgtatattgct
tcagagtctagtgaagattctttctcaggcggagagggaatagttgcagaaggccgcgat
attactactgttgtggctccaaatgctcaagttcgagtgcttcttactgctcgtgaggaa
gtgcgtcaagctcgcagaaataagcaggatattgagcaagaaaatttgcaaaataatgaa
tctaagaataatgaatctgaagaagacgatattcgcgctcgtgatgctaaagatgctaaa
gttacgaattttcttaaagctgcagacggtgttacaactctagataattctgatttaact
tttgagcagactcttgacgcgcttgtagagattgttgacgatgcaattgagcaagatgag
tacgaccgttatgctgcaaatcttgaaggctacgatcttgatgatgaagatcgtgcgctt
cttagcggtgattttgcaagcgatgatgaatcgaaagatacaaaagctgttggagtaatc
gccgttataggtcgaccaaacgttggaaaatcaacgcttgtaaatcgtattttgggccat
cgtgtcgctgttgtagaagatactccaggtgttactagagatcgcgtaagttacgacgct
gagtgggctggaaccaacttcaagctggttgacactggcggctgggaagcagatgttgaa
ggcattgattcttctattgctcaacaggcgcaagtggcagtgcgtttaagcgatgctgtg
attttcctagtagatggtcaagttggtttaactgctacagacgagcgtattgtttcaatg
cttcgcgctgcaggtaagcctattactttggcagttaacaaggttgacgacgctagaagc
gagtatttaactgcagagttttggaagctcggaatgggtgagccttacggaatttctgca
atgcatggcagaggcgttggagatttgcttgacgcggctcttaactctttgaagaaagcg
aataaaacttcaggattcttgactccagaaggacttcgcagagttgctttagttgggcgt
ccaaatgttggtaagtcttcgcttttgaaccatttagctcatgaagaacgttctgttgta
aacgatttggctggaactactcgagatcctgttgatgaggttgtgcgagttgatggagaa
gactggctgtttattgacactgctggtattaagcgcaggcagcataagcttactggtgct
gaatactattcttcacttcgtacgcaagctgcgattgagcgttctgaacttgctttgatt
cttttcgattcttcccagccgattgcagagcaggatttgaaagttatgagccaggctgta
gacgcgggtcgagcaatcgtacttgtgtttaacaagtgggacttgatggacgaattttcc
agacagcgcatggaacgcttgtggaaaactgagtttgagcgcgtaacttgggctgagcgc
gttaatctctccgcaaaaacaggatggcatacgaatcgtcttgcgcgcgctatgcgaaca
gctttagacagctgggataagcgcattcctacaggcaagctcaacgctttcttaggtcgt
attcagtctgctcatccgcatcctttgcgaggcggaaagcaagcgagaatcttgtttgct
actcaggcttctacgcgcccaccgcgtttcgtgatattcgcaacaggcttcttagagcac
ggttaccgtcgctttattgagcgttctcttcgagaagagtttggatttgagggaactcct
attcaaatctctgtaaaagtacgagataagaagaagcgcaagtaa
DBGET
integrated database retrieval system
