Gardnerella vaginalis ATCC 14019: HMPREF0421_20849
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Entry
HMPREF0421_20849 CDS
T01344
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gvg03009
]
HMPREF0421_20849
Enzymes [BR:
gvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HMPREF0421_20849
Ribosome biogenesis [BR:
gvg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF0421_20849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADP38931
UniProt:
E3DA37
LinkDB
All DBs
Position
complement(1041493..1042266)
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AA seq
257 aa
AA seq
DB search
MPNAYSRANQAQQESKNAVRLQKLLAEAGFGSRRKCEEIILDGRVEVDDELVTTLGTRVD
PSKQKIRVDGSRVKFNHKLVTLALNKPKRVLSAMDDPKGRFTLRDIVGDKYERIFHMGRL
DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATVEGKINGMVCRRLVSQGVNLEDGWIK
LDRCAIIDQNHDATIVKVVLHSGKNRIVRRIFGAVGYPVKRLVRTQIGPIKLGDLKAGSY
RVLSQTEVRSLSKEVGL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgcatattcccgcgccaatcaggcgcaacaagaatccaaaaacgctgttcga
ctgcaaaagctacttgctgaagcgggatttggttcacgccgaaagtgtgaagaaataatc
ttagatgggcgtgttgaagtagatgatgagcttgtaacaacactcggaactcgagtagat
ccaagtaaacaaaaaatacgcgtagacggatcgagagtgaaatttaatcacaagcttgta
acgctcgcgcttaataagcctaaaagagttttgagcgcaatggatgatccaaaaggtcgc
ttcactttaagagacattgttggagataagtacgagcgaattttccacatgggacgcttg
gactacgattctgaaggtcttattttaatgaccaacgatggtgagttaagccagcatgtt
atgcatccaaagtatgaagttgagaaaacgtatattgcaactgttgaaggcaagatcaac
ggaatggtttgccgcaggctagtttcgcaaggcgtaaatctggaagacggctggattaag
ctcgatcgctgtgcaataatcgaccaaaatcacgatgcaacaatcgtaaaagttgtttta
cactctggcaaaaatcgcattgtgcgcaggatttttggagccgtaggatatcctgtaaag
cgtcttgtgcgtactcaaattgggcctattaagttaggggacttaaaagctggatcgtat
cgagtgctttctcaaacagaagtgcgctcgctttctaaggaggttggcctgtga
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