Gardnerella vaginalis ATCC 14019: HMPREF0421_20902
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Entry
HMPREF0421_20902 CDS
T01344
Name
(GenBank) cyclic nucleotide-binding domain protein
KO
K21556
CRP/FNR family transcriptional regulator, polysaccharide utilization system transcription regulator
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvg03000
]
HMPREF0421_20902
Transcription factors [BR:
gvg03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HMPREF0421_20902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_11
Rrf2
HTH_7
HTH_24
HTH_45
HTH_29
HTH_17
GP3_package
TrmB
Xre-like-HTH
HVO_A0261_N
Phage_rep_org_N
HTH_23
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ADP38984
LinkDB
All DBs
Position
1105437..1106138
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AA seq
233 aa
AA seq
DB search
MNNKCIATALAFILDATDSMSTIVKIEKAKQLIPHQFIRTYHTNDVLINMNSAAKYVYIF
LDGKATVRGSLNRNDGVISNIEPIEILGLFELVTNEPHYTAFVMAEEKSLVFRIPSSLFR
EIVQENGKICYFVLSIFAKTAGRTMQEAATKRLLESIDIIGYYLYTQANKDRPYICPYTR
EDLAKILNINLRTLYRYLESMKKENLITSIRGKLVITDQHFALLHKRYSSMTI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaatgtatagcaacggcgcttgcatttatactagatgcaacggatagcatg
agtacgattgtaaaaatagagaaagcaaaacaactcattcctcaccaattcatacgaaca
tatcacactaatgatgttctcataaatatgaatagtgcagcaaaatatgtatatatcttt
ttagatggtaaagctacagttcgaggaagtttaaatcgtaacgatggagttatttcaaat
attgaaccaatagaaatactgggactttttgaactcgttaccaatgaaccgcattatact
gctttcgttatggcagaagaaaaaagtttggtatttagaattccatcttcgctatttcgc
gaaattgttcaagaaaatggcaaaatttgctatttcgtattatcaatattcgcaaaaaca
gcgggaagaacaatgcaagaagcagcaacgaaaagactacttgaatcaattgacattatt
ggatattatttatatactcaagcaaacaaagatagaccgtatatatgcccatatactcgc
gaagatttagcaaaaatactaaatattaatttacgaactttatacaggtatctagaatcc
atgaaaaaagagaatcttataacaagcataagaggaaaattggttataacggaccaacat
tttgctttgctacataaaagatactcttctatgactatttaa
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