Gardnerella vaginalis ATCC 14019: HMPREF0421_20939
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Entry
HMPREF0421_20939 CDS
T01344
Name
(GenBank) hypothetical protein
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvg03032
]
HMPREF0421_20939
03029 Mitochondrial biogenesis [BR:
gvg03029
]
HMPREF0421_20939
Enzymes [BR:
gvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HMPREF0421_20939
DNA replication proteins [BR:
gvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
HMPREF0421_20939
Mitochondrial biogenesis [BR:
gvg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
HMPREF0421_20939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
Viral_helicase1
SH3_13
AAA_16
Zeta_toxin
nSTAND3
MeaB
AAA
NTPase_1
SLFN-g3_helicase
AAA_5
AAA_14
cobW
TrwB_AAD_bind
KAP_NTPase
KdpD
AAA_18
ABC_tran
MobB
AAA_24
NPHP3_N
AAA_7
NAT10_TcmA_helicase
AAA_25
ResIII
PhoH
CtsR_C
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ADP39021
UniProt:
E3DAC7
LinkDB
All DBs
Position
complement(1151413..1152861)
Genome browser
AA seq
482 aa
AA seq
DB search
MKQSEALTIINAGASVFITGAPGAGKTYVLNAAIREMRKNGLSVAVTASTGIAATHLNGQ
TIHSWSGVGVSNALSDSLLKTIRARRGKRIKATEVLVLDEVSMIHAWLFDMVDEVCRKVR
KNSAPFGGLQVVISGDFFQLPPVSTSMRNRDVFEPSPEFIESREKYAAAGKNPEGYITES
FAWDALKPVVCYLTEQHRQDDGKLLEVLTDIRGGLVSYEDKQVLASRLGEYPQDDEVSVH
LFPTNSQADGLNNVQLAAIDAEPHEFVATEAGPKNLVERLKKNMLAPERLVLKVGAAVMA
LRNDQDKQYVNGSVGRVLRFAPESKGGWPIVEFENGNIVTLKPAAWEMTDGETVLASVNQ
VPLRCAWGITIHKSQGMTLDSAVMDLRRTFAPGMGYVALSRVENLGGLYLEGINDRAFSV
SADAVLLDGFLREASEKASKLLTNSGANSFIKNTLENEFVSQQELDIFASTSNDEFGFND
EF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatccgaagccctaaccataatcaacgctggtgcaagcgttttcattaccggc
gctccgggtgcaggtaaaacctacgtattaaacgcggctattcgcgaaatgcgaaaaaac
ggtttaagcgtggctgtaacggcttctacaggaatcgcagcaacgcatttaaacggtcaa
accattcactcgtggagtggagttggagtttcaaacgcgcttagcgattcgcttcttaaa
accattagagctaggcgagggaaacgcataaaagccacggaagtgctcgtgttggacgaa
gtttcaatgattcacgcgtggcttttcgacatggttgatgaagtatgccgcaaagtgcgc
aaaaactctgctcccttcggcggacttcaagtagttatttcgggagatttcttccagctg
cctcctgtgagtacttctatgcgaaatcgcgatgtgttcgagccaagtccagagtttatt
gagtcgcgcgaaaagtatgctgctgctggcaaaaatccagaaggctatattacggaatct
ttcgcctgggatgctttaaagcctgttgtgtgctatttaactgagcaacatcgtcaggat
gacggcaaattgcttgaagttttgacggatattcgtggcggtcttgtaagctacgaagat
aagcaagtgcttgccagtcgccttggtgagtatccgcaagacgatgaagtttcggttcat
cttttccctacgaactcacaagcagatggtttaaataatgtgcagcttgcggcaattgat
gctgagcctcacgaattcgtggcaacagaagccggccctaaaaatctcgtcgagcgttta
aaaaagaatatgctcgctccagaacggcttgtattaaaggttggagctgcagtgatggcg
ttgcgaaatgatcaagataagcagtatgtgaacggctcggttgggcgagttttgagattc
gcacctgaatctaaaggtggatggccgattgttgagtttgaaaacggcaatattgtcact
cttaagccggctgcttgggaaatgacggatggtgagactgttcttgctagcgtaaatcaa
gtgccacttagatgcgcgtggggaattacgattcataaatcgcaaggtatgacgcttgac
agtgcggtaatggatttgcgtagaacttttgctcccggaatgggatatgtggcgctttct
cgcgtggaaaatcttggcgggctttatttggaaggtattaacgatcgcgcgtttagtgtt
tcggcggatgctgtactgttagacggattcttgcgtgaggcttctgagaaagcaagtaag
cttcttactaacagtggtgccaattctttcataaaaaacacgttagaaaacgaattcgtt
agtcagcaggaacttgatatttttgcaagtactagcaatgatgagtttggattcaatgac
gagttttag
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