Gardnerella vaginalis ATCC 14019: HMPREF0421_21073
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Entry
HMPREF0421_21073 CDS
T01344
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_21073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_21073
01504 Antimicrobial resistance genes [BR:
gvg01504
]
HMPREF0421_21073
Transporters [BR:
gvg02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HMPREF0421_21073
Antimicrobial resistance genes [BR:
gvg01504
]
Gene variants
Macrolide resistance genes
Transporters
HMPREF0421_21073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
RsgA_GTPase
nSTAND6
MMR_HSR1
NACHT
AAA_28
ATPase_2
AAA_23
AAA_16
VapE-like_dom
AAA_19
NB-ARC
TEDC1
AAA_13
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
ADP39155
UniProt:
E3DAR1
LinkDB
All DBs
Position
complement(1288856..1290334)
Genome browser
AA seq
492 aa
AA seq
DB search
MSVIKIENLTFSYYGYVKPIFKNVSFSFDTNWKTGLIGRNGIGKSTLFKLLLNQETYQGK
ISKDVEFIKFPPNISDTSKLGIELYKELISDDEEWKLFRELSLLNVDENLVYREFETLSK
GEQTKILLAILFTREDGFLLIDEPTNHLDMDGRKIVSEYLKSKKGFLLISHDRDFLDGCI
NHVISINRNSIDVQSGNFTSWYENKVMKDQFEISQNERLRKDIKRLKESARQSQIWSDKI
ENTKNGVKVSGVKPDKGHIGHQSAKMMKKSKNLENRQNKAIEEKQSLLKDIETKESLLLH
PLHHHKNPLISVSNLSSCYGERQILNNVSFEIKQGDIVAIYGGNGSGKSTLIKILLGINH
EYTGEIKLAGNLKISYIPQDTSNLTGSLNEYIHKQDVDETLCKTILRKLDFSRELFEMDM
KNYSDGQKKKVLIAVSFSKPAHIFVWDEPLNYIDVISRIQIEEIIKEAKPTLIFVEHDKR
FVEDIANKIIQF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaattaaaattgaaaacctcactttctcatattatggatatgtaaaacccata
tttaaaaatgtatcgttttcctttgatacaaactggaaaacgggattgataggaagaaat
ggaatcggtaaatcaactctatttaagttacttttaaatcaagaaacttatcaaggtaaa
ataagcaaggatgttgaatttattaaatttccaccaaatataagcgatacttcaaaatta
ggaattgagttatataaagaactaatatcagatgatgaagaatggaagttatttagagaa
ctcagtttgctaaatgtagatgagaaccttgtttacagagagtttgaaacgctttctaaa
ggggaacaaacaaaaatccttttagctattttgtttacaagagaagatggctttttactt
attgatgaaccaacaaaccatttagatatggacggaagaaaaattgtaagtgaatatctg
aaaagtaaaaaaggatttttgcttatatctcatgatagagattttttagatggttgtatc
aatcatgttatttctattaacaggaattctattgatgtccaatcgggaaattttacatca
tggtatgaaaacaaagtgatgaaagaccaatttgaaattagtcaaaatgagagattaaga
aaagatattaaacgattaaaagagtctgcaagacaaagtcaaatttggtctgataaaatt
gaaaatactaaaaatggtgtaaaagtatcaggtgtaaaaccagacaaaggacatataggt
catcaatcagccaagatgatgaaaaaatctaagaatttggagaatagacaaaacaaggca
atagaagaaaaacagagtttactaaaagatatcgaaacaaaggaaagtctattattgcat
ccattacatcatcataaaaatcctctaatatcggttagcaatttatcatcatgctatgga
gagagacagatcctaaataatgtaagtttcgagataaagcaaggcgacatagtggctata
tatgggggtaatggtagcggaaaatcaaccttgattaaaattttattaggtataaatcac
gagtatacaggtgagataaaattagcaggtaatttaaaaatctcgtatattcctcaagac
acatctaatttaacaggtagcctaaatgaatatattcacaagcaagatgttgatgaaaca
ttgtgtaaaacaattctaagaaaattagatttttcaagagaattatttgaaatggatatg
aagaattatagtgatggacaaaaaaagaaagttttaattgctgtaagtttctcaaagcca
gctcatatatttgtttgggacgaaccactgaattatatagatgtaatatcaagaatacag
attgaggaaattataaaagaagcaaagcctacactcatatttgtggaacacgataagcga
tttgtagaagatatcgctaataaaataatacaattttaa
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