Gardnerella vaginalis ATCC 14019: HMPREF0421_21083
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Entry
HMPREF0421_21083 CDS
T01344
Name
(GenBank) ABC transporter, substrate-binding protein, family 5
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg01501
beta-Lactam resistance
gvg02010
ABC transporters
gvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_21083
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0421_21083
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMPREF0421_21083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_21083
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
HMPREF0421_21083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADP39165
UniProt:
E3DAS1
LinkDB
All DBs
Position
complement(1300135..1301766)
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AA seq
543 aa
AA seq
DB search
MKNKALLFAAAACSIAMLLGGCGSSASKTAQTNGGKVVITVNNSEPQNELVPGNINENAG
GRPALLVNSMLVTFDEKGNTVNEDAESVTPNADATQYTVKLKKDKKFSDGTPITAESFTK
AWSFVSNAKNAQKCSSFFQTIKGYEDLQKNDTKGDEQLSGLKVVDKYTFTVDLNQPDSVF
AIKVGYLAFAPLPESFYKNPKAYGEKPVSSGPYLFKSWDHNKQIELVKNPDYDGPRKAKN
DGITFKIYTDGTAAYRDVQSGNLDMTDNIPDTETKTFQKDTTVKAYNRPGSVIQQFGIPA
KLPHFDVTTEEGRLRRQAVSMAIDRETIIKKVLNNTASPANEFTSPLTPGYKADLKGHEN
LKFNAAKAKELWAKADKISKYDGPLTFTYNADGNAKSVFDAVVNSLKNHLGINAETTPVP
TFQEFRNACEQRQIKGAWRAGWMPDYPSPENYLTQEFASVAADGNGSNEADYKNPKFDAL
LKKASSSKQAEATKLYQQANEILLEDLPYVPLFYSNAKAVMVPSLKGFVMDWQNMPLYYK
LHK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaggcattactttttgccgcagctgcgtgctcgattgctatgctgctcggt
ggatgcggttcttctgcttcgaagaccgctcaaacaaatggtggcaaggttgttattact
gtaaacaactccgagcctcagaacgagcttgttccgggaaacattaacgaaaatgctggt
ggtcgtcctgctctattggtcaactccatgttggtcacttttgatgaaaagggcaacacg
gtaaatgaagatgccgagagcgtaactccaaacgccgatgcaacccaatacactgttaag
cttaaaaaagataagaagttcagcgatggcactccaatcaccgcagaaagctttactaag
gcttggagctttgtatcaaacgctaagaatgctcagaagtgctcttccttcttccaaacc
attaagggctacgaagacttgcagaagaatgatactaagggcgacgagcagctttctggc
ttaaaggttgtagataagtacacctttactgttgatttgaaccagccagattctgtgttt
gctattaaggttggttaccttgcattcgctcctcttccagaatccttctacaagaatcca
aaggcttatggcgaaaaaccagtttcttctggaccatacttgtttaagtcttgggatcac
aacaagcagatcgaacttgtaaagaacccagattacgatggcccacgcaaggctaagaat
gacggcattacctttaagatctacaccgacggcaccgctgcttaccgcgatgttcagtct
ggcaatcttgatatgaccgataacattccagataccgaaaccaagactttccaaaaggac
accactgtgaaggcatacaaccgtccaggttctgtaatccagcagttcggtattcctgca
aaattgccacatttcgatgtaactaccgaagaaggccgcttgcgtcgtcaagctgtttct
atggcaatcgaccgcgaaaccatcatcaagaaggttcttaacaacactgcatctcctgca
aacgagttcacttctcctttgactccaggctacaaggcagatcttaagggtcacgaaaat
cttaagtttaatgccgcaaaggctaaggaactttgggcaaaggcagacaagatctctaag
tatgatggtcctcttacctttacttacaacgccgatggcaacgctaagtctgtgttcgac
gcagttgtaaactccctcaagaatcatcttggaattaatgctgaaaccactccagttcca
acattccaagagttccgtaacgcatgcgaacagcgtcagattaaaggtgcatggcgtgca
ggctggatgccagattacccaagcccagaaaactacttgactcaggaatttgcttccgtt
gctgcagatggcaatggttctaacgaagctgattacaagaatcctaagttcgatgctttg
cttaagaaggcttcttcttctaagcaagctgaggcaactaagctttatcagcaagctaac
gagattcttcttgaggatcttccatacgtaccactgttctactcgaacgctaaggctgtt
atggttccaagcttgaagggctttgtaatggattggcagaatatgccactttactacaag
ctccacaagtaa
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