Gardnerella vaginalis ATCC 14019: HMPREF0421_21138
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Entry
HMPREF0421_21138 CDS
T01344
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0421_21138 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvg01007
]
HMPREF0421_21138 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvg03016
]
HMPREF0421_21138 (cysS)
Enzymes [BR:
gvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
HMPREF0421_21138 (cysS)
Amino acid related enzymes [BR:
gvg01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HMPREF0421_21138 (cysS)
Transfer RNA biogenesis [BR:
gvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0421_21138 (cysS)
Prokaryotic type
HMPREF0421_21138 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
CysS_C
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ADP39220
UniProt:
E3D750
LinkDB
All DBs
Position
1360057..1361646
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AA seq
529 aa
AA seq
DB search
MLENTNRTLTAAAARLRLYNTATHNTSGFTTVTPGHVGMYVCGATVQSSPHIGHIRAAIA
FDVVRRWLLRLGYTVTFVRNVTDIDDKIIKKASENGQTWWQRAYIYEREFTKAYNTLGVM
PPTVEPRATGHINDMVELIQRLINRGHAYAITDANGNPTGNVYFSVPSWQDYGALTHQNG
NSDGSNSDDKSSKADKYNPVDPADASPDKHDARDFALWKAPCDFDQKDARWNTPFGAGRP
GWHIECSAMSHRYLGDSFDIHGGGLDLRFPHHENEMAQTLAAGWKSANVWMHSAWVTSKG
EKMSKSLGNGLSVPSVLAQKSAWVVRYALGGVQYRAMLEWSDQSLTEAQSAYDRISNFLE
RANRVIENQPDYAEVQSVDADNLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLDDYAQ
NQNENQSNGIKSLIKTCVLQVRAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVL
ESLIANQLEQRAIARAAKDFARADAIRDSLTAAGVVIEDCAQGSSWHLS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaatacgaacagaactcttacagcagcagcggcacgattgcgcctatataac
acagcaacgcacaacactagcgggtttacaacagttactcctggccacgttggcatgtac
gtgtgtggcgcaactgtgcaaagctcacctcatataggtcatattcgcgcagcaatcgcc
ttcgatgttgttcgccgatggcttttgcgccttggctacactgttacttttgttagaaat
gttacagatattgacgataaaatcatcaaaaaagctagcgaaaatggccaaacatggtgg
cagcgcgcctacatttacgagcgcgagttcactaaagcttacaacactcttggcgttatg
ccgcctactgtggagccgcgcgcgactggtcacataaacgatatggtggagcttatacag
cgcttgattaatcgcggacacgcatacgcaataacagacgcgaatggcaatcctactgga
aacgtgtattttagtgtgccaagttggcaagattacggcgcgctaacgcatcaaaatggt
aattcagacggcagcaatagcgacgacaaatccagcaaagccgacaaatacaatccagtt
gaccctgctgacgcaagcccagataagcatgatgctcgcgattttgcactttggaaagca
ccttgcgattttgaccaaaaagacgcgcgctggaacacgccgtttggagcaggacgccca
ggttggcacattgaatgctcagcaatgagccaccgctatcttggcgattccttcgacatt
cacggcggcggactagacttgcgcttcccacaccacgaaaacgagatggcacaaacactc
gctgctggatggaagagtgcaaacgtgtggatgcactccgcgtgggttacatctaagggc
gaaaaaatgagcaaatcccttggaaacggtctttctgttccatctgttttagctcaaaaa
tccgcgtgggtcgtgcgatacgcgctaggcggcgtgcagtaccgcgcaatgcttgagtgg
tcggatcaatctttgaccgaggcacaatctgcttatgatcgcatatctaacttcctcgag
cgcgcaaatcgcgtaatcgaaaatcagccagattatgcggaagttcaaagcgttgatgca
gataatcttccaaaagattttactaaagctatgaacgacgatattaacgtttcgggcgcg
ttggctgcgatttttactgcgattcgctctggtaacgcgcttttggatgactatgcgcaa
aatcaaaacgaaaatcaaagcaacggcattaaaagccttattaagacttgtgttttgcaa
gttcgtgcaatgctagacactcttggactagacccttattctccacaatggcgcaatctt
tcgcaaaaatcgcaagatttaggtgcgaataatggcgcaagcgcggagcataaggttctt
gaatctttgattgcaaatcagcttgaacaaagggctattgcacgcgcagctaaggatttt
gcacgcgcagacgcgattcgcgactctttaaccgccgctggcgttgtaatcgaagattgc
gcacaagggtcatcgtggcatttgtcttaa
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