Gardnerella vaginalis ATCC 14019: HMPREF0421_21178
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Entry
HMPREF0421_21178 CDS
T01344
Name
(GenBank) ABC transporter, solute-binding protein
KO
K17329
N,N'-diacetylchitobiose transport system substrate-binding protein
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0421_21178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvg02000
]
HMPREF0421_21178
Transporters [BR:
gvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
N,N'-Diacetylchitobiose transporter
HMPREF0421_21178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
O_anti_polymase
Motif
Other DBs
NCBI-ProteinID:
ADP39260
UniProt:
E3D790
LinkDB
All DBs
Position
complement(1410315..1411691)
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AA seq
458 aa
AA seq
DB search
MVRSQICFQGARMRRIYGKCTAYAVITLAMAIMLSGCSIGAPTSSVSSQSSSKNGITVWV
MQDDFTKETLNAINKQFEAQTGVRVHVQVQPWDGISTKLTTALSTSRPPDVVDIGNTKIA
DFAASGGLLDITEHEKMLSQGKRWLKGLREPAIYKDKLYAVPAFAASRVVIYNKRIWSSA
GITNQPTTFTQLISALNTIKQAHKNEADFSAMYLPGQNWFAGMQFVWDCGGSLASFNGMQ
WHSSAISKKTLQGLKKWADFQNAFSTEASRSAEINNPDQAQILAQQKASAVLTNSAAVTK
AISINPSLSRKDFATFPMPSINGKGIQPSVLAGSDWAIPSRSSNVALALKWIRIAASPLI
QRKWIVEHDGWLPNSIDLLDEYLHSRDLDEVQKGFFETARVSQSTPAAPGWSTIEADGSL
KELFASSAMSAKSVLQAARVFHDHAQEIFSHNQVGGDL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtcaaatatgttttcaaggagcgcgcatgagacgaatatacggaaagtgt
actgcttatgcggttattacgctagcaatggcaataatgcttagtggatgctctatagga
gcgccaacaagcagcgtatcttcccaatcctcatccaaaaatggcataacagtgtgggtt
atgcaagacgattttacaaaagaaacacttaacgcaatcaacaaacagtttgaagcacaa
acaggcgtgcgagtacatgtacaagttcagccctgggacggtatttctacaaaacttaca
actgcattatctacatctcgtccgccagatgttgttgatattggtaatacaaaaatagcg
gattttgcagcaagtggaggattactagatataacagaacacgaaaaaatgctttcacaa
ggtaaacgttggcttaaaggattacgagagccagctatttataaagataagctgtatgct
gtcccagcatttgcagcatctagagttgttatttacaacaaacgcatatggtcttcagct
ggaataacaaatcagccaacaacttttactcagctgatttctgcacttaacacaataaaa
caagctcacaaaaatgaagcggattttagtgcaatgtatcttccaggacagaattggttt
gctggaatgcaatttgtttgggattgtggtggaagcttagcttcattcaatggaatgcaa
tggcattcgtctgcaataagtaagaaaaccttacaaggacttaaaaaatgggcagatttt
caaaacgcattctcaacagaagcatcaagatctgcagaaataaataatcctgatcaagcg
caaatactagctcaacaaaaagcttcagcagtattgacaaatagtgcagctgttacaaag
gcaatctcaattaatccatctctttctagaaaagattttgccacatttccaatgccaagc
ataaatggtaagggtatacaaccttctgttcttgctggttcagactgggcaataccgtct
agaagtagcaacgttgcgttggcattaaaatggatacgcattgctgcaagccctttaatt
cagcgtaagtggatagtggaacacgatggttggcttcctaatagtattgacttgttggat
gaatatttacattctcgcgatttagacgaggtgcaaaaaggattcttcgaaacagctaga
gtatctcaatcaactcctgcagctcctggatggtcaactatcgaagcagatggttctctc
aaagaattattcgcttcatctgctatgtctgcaaaatctgttttgcaagcagcacgcgta
tttcatgaccatgcacaagagattttctctcataatcaggttggtggtgacttatga
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