Gardnerella vaginalis ATCC 14019: HMPREF0421_21227
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Entry
HMPREF0421_21227 CDS
T01344
Symbol
pulA
Name
(GenBank) pullulanase, type I
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00500
Starch and sucrose metabolism
gvg01100
Metabolic pathways
gvg01110
Biosynthesis of secondary metabolites
Module
gvg_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0421_21227 (pulA)
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
HMPREF0421_21227 (pulA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
CBM_25
Alpha-amylase_C
CBM_48
Pullul_strch_C
CBM53
CBM26
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
ADP39309
UniProt:
E3D7L7
LinkDB
All DBs
Position
complement(1507358..1513402)
Genome browser
AA seq
2014 aa
AA seq
DB search
MQMVAHRHLASKIVSMIAASAMLITGFAVVGNASASSESSSESSNPQSSNLTLNRKGVIV
TAFQQNWKSIAQECKTTYGPEGVKYVQVSPPNEHVKGTQWWTSYQPVSYKLKSKLGTENE
FKSMIDTCKVAGVGIIADAVINHMTGAGDTHTEGVGGSQYSAAKEDFPDAGYKKDDFHQD
ARNIEHYNNAEEVWNRRLVGLLDLDTSKQHVRETLGKYFANLLKLGVAGFRIDAVKHISP
TDMAAIKKAAADAAHTTPDKIWWMQETIGDPSEAKEIQPDQHLKEGEVNEFQYSYRLKSN
FYGSISNLKNITNGLVPSDKASIFVTNWDTPRENYVRTLTYKDGPRYELANAFMLGYPYG
NPNIYSGYRFDAKNKDDGAPGATETSVPNVDCSPTTGWQCTQRWTSIRGMVGFFNAVNGA
QVTNWQESDNNNIAFSRAGKGFLAINNTPNAKKVLYTTDLPNGEYCNVYAAGNCSKTVKV
TDGKVAATIAPYSAIALHVDSKADSASKAGPARDESDPKYNVDDAKDQSTTVYFNAKNKA
GNPSSVNIHYQIGNGSWTAVPGRPMRKVCDGWFARTIPNNGKQITAVFNDGGSNWYNKNN
QSGANFEIQAGSKTYVVDADLKGSESASIPCKVEDTSSKPTELKTKIVIHYKQKYGDNRH
MGVYIWGLKNADGQEIKGAWHEFNGQDAFGKTYAVEADGTYESGKVGFIITEKPVDGQDW
HKDGGDRNIWQIEDGVGEAWVYGGDSNTFAEPPSEVSNKLNSIKTLNVTVHYRRTNKDYA
GWNLWTWCGSEKGVKQDFTAHDDFGKIAEYTFHNDSGIKDSKFIVRYSMQGNDWVSKDPG
EGDRPIPAKAITLSEDGNTGNAEIWLMQGDSRVYLSPNVINTKANAINADITSFKEFTVN
VSGDPSEVEKKNVTVTDVTDSKKNQHKTIDISQVAVVDNRIVITAKNELDLKKMYEINIK
GVGGMPKTVSASTVKGSKIVRTDEFDQKYAYTGDDLGAVVKDGSTTFKLWAPTAAKVELV
TYKSTDEKAQEDKKQDMTLGTEDGKLGVWSITTSYAKAGTAYTYKVYFADGTVNNSPDPY
AKAAVRNGMRSVVFGGNMATPVSRKASFGKRPTDATIAEMNIRDFSIHESSGVDVAKRGK
YLGVIQSGAKKDGKPTGFDYLKSLGITHVQIMPMYDFGSVNEAGDLSYVDKNDKDNPHQN
WGYDPINYNVPEGSYASDSANPATRITELKQMVEGLHKAGLRVIMDVVYNHVYNAEKNAF
GQTVPGYYFRYNDDGSLSNRSGCGNDTASERKMMRKYIVDSVKYWAKEYGIDGFRFDLMG
LIDLETIKEVREAVHAIDPNSIILGEGWDMSQLPYGNRTIQPNAYKLAENNGVAFFNDSF
RDAVKGQGDDDVAGFVSGNRGSDNLVMQNLYGCQPGNASCTGRRYANAGQTVQYVEAHDN
LNLYDKLKKSLPNETEENLKKRVMLANSLVMFAHGMPFFELGQEFLRSKNGNANSYNAGD
GDNSVKWDLVKTNEDAVEYFKALIKLRNEIPALRDSEYSDVNNNMHWIKSSDGINAFSVD
NNGKTYVFIFNANSGEFTVNIGKGKYRVRIADGKANSNDESVCPEASVDDNGNYKVSALS
TSVLVKDAEKKNDNPFANINVDDVLKYKMNPLDINKLKDGSKPGTQKPNPSTPGHEQTPG
TVTPSPQPPVPGPVVPNPAPAPGPHPQPGSNPVNPAPQPAPVPTPTPGETHPGTHEPNSS
TPGREQTPGDSDTENHPAPHTLVPDVGTAPSNSESGSASQQGSKSNTPAHEPNNSIESKP
NAESHSTSEYQTHSKPKQNVHENSDQSKPAKTKPESSSNSAVSAPAKPSSAAPTPTAPAT
VQQLKSELRGTLLVRDNNVANAGIVNKVNIRIQNGEFIERLNREGIAYAYAYIYSSPRLL
KGSDGSKYVTVRMVNGVPQFDAIFPAGYSGKHTVLLVDESGKQIAWTEVTVVDNGVSKRG
GSMLQTGSNIVYTFALFIILTFVAAIARYKVAFR
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggtcgctcatcgccaccttgcgtcgaaaatagtttctatgattgcagcgagt
gcaatgttaataacaggttttgctgttgttggcaatgcaagcgctagtagtgagtctagt
agtgaatctagtaatcctcaatctagcaatctaactcttaaccgtaagggcgttattgtt
actgcattccagcagaattggaagagtattgctcaagaatgcaaaacaacttatggtcct
gagggtgttaagtatgtgcaggtgtctcctccaaatgagcatgtaaagggtactcagtgg
tggacttcttatcagcctgttagctataaattaaagtcaaaactcggtactgaaaatgag
tttaagagcatgattgacacttgcaaagttgcaggtgttggaattattgcggatgctgtt
attaatcacatgactggtgctggtgacactcatacagagggtgttggtgggagccaatat
agcgctgctaaagaagatttcccagatgctggatataagaaggatgatttccatcaagat
gctaggaatattgagcactataacaatgcggaggaagtgtggaatcgcaggcttgttggc
ttgcttgatttggatacgtcaaagcagcatgtgcgcgaaactttaggcaagtactttgct
aatttgctgaaacttggtgttgctggcttccgtatcgatgcagtaaagcatatttctcca
acagatatggctgcgattaagaaagctgctgctgatgctgcgcacactacgcctgacaag
atttggtggatgcaggagacgattggtgatccttctgaagctaaagaaatacagccagat
cagcatttaaaggaaggtgaagtcaacgaattccagtattcctaccgattaaagagcaat
ttttatggttcaatttcgaatctaaagaatattactaatggacttgttccaagcgataaa
gcttcaatttttgttactaattgggatactcctcgagaaaattatgtgcgcactcttact
tataaggatggtcctcgctacgagcttgcaaacgcgtttatgcttggctacccttacgga
aacccaaacatttactcggggtataggtttgatgcaaaaaataaggatgatggtgcgcct
ggtgcgactgaaacctctgttccaaatgtagattgttctccaacaactggttggcagtgc
actcagcgttggacttcgattcgtggaatggttggcttctttaatgctgtaaatggtgct
caagtcactaattggcaggagagtgacaataataacattgcatttagccgcgcaggcaag
ggcttcttagcaattaacaatactccaaacgcaaagaaagttttgtatactactgatttg
ccaaatggtgagtattgcaacgtttatgctgcggggaattgctctaagactgttaaagtt
acagatggcaaggttgctgcgactattgctccttattctgcaattgctttgcatgtggat
tctaaagcagatagcgctagtaaagctggtccagcacgtgatgaatctgatccaaaatac
aatgttgacgatgctaaagaccagtcaacaactgtctattttaatgctaaaaataaagca
ggtaatccaagttctgtaaatattcattatcaaatcggcaatggatcttggactgcagtt
cctggtagaccaatgcgcaaagtttgcgatggttggtttgcaagaacaattcctaataat
ggcaagcaaattactgctgtatttaatgacggtggaagtaattggtataacaagaacaat
cagtctggagcaaactttgaaattcaagctggttcgaaaacttatgtagtagatgccgat
ttgaaaggttctgaatctgctagcattccttgcaaggttgaggacacatcttcaaagcct
actgaattaaagacaaagattgttattcactataagcaaaaatatggtgacaatcgccat
atgggcgtctatatctggggtcttaaaaatgcagatggtcaagagataaaaggtgcttgg
catgaattcaatggtcaagacgcttttggtaagacttacgcagttgaagctgatggcact
tacgagagcggaaaagttggatttattattaccgagaaacccgttgatggtcaggactgg
cataaggacggcggagatcgtaatatctggcaaatcgaagatggtgttggcgaagcttgg
gtttacggaggagattcaaatacttttgcagaacctccatctgaagtctctaacaagctt
aatagcattaaaacattaaatgttactgttcactaccgcagaacaaacaaggattacgct
ggttggaatctttggacttggtgcggtagtgagaagggcgtaaagcaagattttacggct
catgatgatttcggtaagattgcagaatatacattccacaatgattctggcataaaagat
tcaaagtttattgtgcgctattctatgcaaggcaacgattgggtttctaaagatcctggc
gaaggcgatcgcccaattcctgcaaaagcaattactttaagcgaagatggtaacactggt
aatgctgaaatctggcttatgcagggcgatagtagagtttacttaagcccaaacgtaatc
aacacgaaggctaatgctattaatgctgatattacgtcttttaaggaatttactgtaaac
gtgagcggcgacccttcggaagttgagaagaaaaatgttactgtaactgatgttacagat
tcaaagaaaaatcaacacaagacaatagatatttcgcaagttgctgttgtggataatagg
atcgtaatcactgcaaagaacgaattagatcttaagaaaatgtatgaaatcaacattaag
ggtgttggtggaatgcctaaaacagtgtctgcttcaactgttaaaggttctaagattgtt
cgcactgatgagtttgatcaaaagtatgcgtacacaggcgatgacttgggtgctgttgta
aaagatggttctacgactttcaagctttgggcgccaactgctgcaaaagtggagttagta
acttataagtcaactgatgaaaaagcgcaagaagataaaaagcaagatatgactcttggc
acagaagatggaaagcttggcgtgtggagtattactacgagttatgcaaaagctggcact
gcttatacatacaaggtttattttgcagatggcactgttaataattctccagacccttat
gcaaaagctgctgtgcgaaatggaatgagatccgttgtattcggtggcaacatggcaaca
cctgtatctcgtaaggcatcatttggaaagcgtccaactgatgcgactattgcagaaatg
aatattcgcgacttttcgattcatgaaagttctggcgtagatgttgcaaagcgcggaaag
tatcttggtgtaattcaatctggtgctaaaaaagatggcaagccaactggctttgattat
ttgaagtccctcggcatcactcatgtgcaaatcatgccaatgtatgattttggttctgtt
aatgaagcaggagatttgagttatgttgataagaacgacaaagataatcctcatcaaaac
tggggctatgatccaataaactacaacgttccagaaggctcctatgcgtctgattcagca
aatcctgctacgcgcattactgagctaaagcaaatggttgaaggtctacataaggctggt
ttgcgcgtgattatggacgtggtttataaccatgtttataacgcagaaaagaacgctttt
ggacagactgtgccaggctactacttccgttacaacgatgacggcagcttgtctaataga
tctggttgcggaaacgatactgcttcagagcgcaaaatgatgcgaaagtatattgttgac
tctgtaaagtattgggctaaagagtacggtattgacggcttccgttttgatttgatggga
ttgattgaccttgaaaccattaaggaagtgcgtgaagctgttcatgcaattgacccgaac
tcgattattcttggcgaaggctgggatatgagccaattgccttatggaaaccgcactatt
cagcctaatgcgtataagcttgctgaaaataatggcgttgcgttctttaacgattccttc
cgtgatgctgtaaagggtcaaggagatgatgatgttgctggattcgtgtctggaaacaga
ggcagcgacaatcttgtaatgcaaaatctttacggttgccagcctggaaacgcaagctgc
actggtaggcgctacgcgaatgctggtcagactgtgcaatatgttgaagctcacgacaat
cttaatctttacgataagttgaagaaatccttgcctaatgagacagaagagaatcttaag
aagcgagtaatgcttgctaattcgcttgtaatgtttgcgcatggcatgccattctttgag
cttggtcaagagttcttacgaagcaagaatggtaatgctaatagttacaatgctggcgac
ggtgacaattccgttaagtgggatctagttaaaacgaatgaagatgctgtcgagtacttc
aaagcgttgataaagctaagaaacgagattccagctttacgagattctgaatattctgat
gttaacaataatatgcattggattaagagcagcgatggtattaacgcatttagtgttgac
aacaacggtaaaacgtatgtgtttattttcaatgctaatagtggtgaatttactgtgaat
attggcaaaggaaagtatcgcgtgcgcattgctgatgggaaagctaacagcaatgatgag
tcagtgtgtcctgaagcatctgtagatgacaatggaaattacaaggtttctgctctttcg
acttcagtacttgtgaaggatgctgaaaagaagaacgacaatccttttgcaaatattaat
gttgatgatgttctcaaatataagatgaatcctttggatatcaataagttgaaggatgga
tctaagcctggtacgcagaagccgaatccatctactcctgggcatgaacaaactcctggt
actgttactccatcacctcagccacctgttcctggtcctgtagtgccaaatccggctcca
gcgcctggccctcatcctcagcctggttctaatcctgtgaatccggctcctcagccagcg
ccagttccaactccaactcctggagaaactcatcctggaactcatgagccaaattcatct
acgcctggtcgtgagcaaactcctggagactctgatactgaaaatcatcctgctccacat
actttagtcccagatgtgggtactgctcctagtaattccgaatcaggttctgcatcccag
caaggctctaagtctaatacgcctgctcatgaacctaataatagtattgaatctaagcct
aatgctgagtctcactctacttctgaatatcaaactcattcaaaacctaagcagaatgtg
catgaaaattcagatcagtctaaaccagctaaaacaaaacctgaatcttcctcaaattct
gctgtatctgcgcctgctaagccatcatcagctgctccaactcctactgcaccggcaaca
gtgcagcagcttaagtcagagctaagaggaactctgctagtacgagacaataatgttgcg
aatgctggaattgtgaacaaagtaaacattcgcattcaaaacggcgagtttattgaacgt
ctgaatcgtgaaggtattgcatatgcttacgcatacatctactcgtctccgcgattgctt
aaaggctccgacggttcaaagtatgttactgtacgaatggtgaatggcgtgcctcaattc
gatgcaatattcccagctggatactctggtaaacacactgttctacttgtagacgagagt
ggcaaacaaatcgcatggactgaagtaactgttgtagataatggtgtttcaaagcgtggt
ggatctatgcttcaaacaggaagcaacattgtttatacttttgcgctgttcattatactt
acatttgttgcagctattgctcgttataaagttgcatttagatag
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