Gardnerella vaginalis ATCC 14019: HMPREF0421_21319
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Entry
HMPREF0421_21319 CDS
T01344
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0421_21319 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvg01007
]
HMPREF0421_21319 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvg03016
]
HMPREF0421_21319 (valS)
Enzymes [BR:
gvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
HMPREF0421_21319 (valS)
Amino acid related enzymes [BR:
gvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HMPREF0421_21319 (valS)
Transfer RNA biogenesis [BR:
gvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF0421_21319 (valS)
Prokaryotic type
HMPREF0421_21319 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
CypI
Motif
Other DBs
NCBI-ProteinID:
ADP39401
UniProt:
E3D824
LinkDB
All DBs
Position
complement(1615660..1618428)
Genome browser
AA seq
922 aa
AA seq
DB search
MSEQDNNTVKHAHLTPLLNKVGVDGLEDKWRSNWDEAKTYAFHNSRDRKAVYSIDTPPPT
VSGHLHVGHVFSYTHTDVIARYKRMQGFDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLK
YDPDFKPPFEGTEGKKIEAKDQVPVSRQNFIELCERLTSQDEKLFEALWRRLGLSVDWSQ
TYHTIGEQPRRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTAVAQAELEAREYPGFYHKI
AFRFEDGTPIYIETTRPELLAACTSLIAHPDDERYKKYFGQEVYSPLFKVKVPILAHPAA
QMDKGAGIAMCCTFGDVTDVEWWRDLSLPTRPIIQRNGRIVMTTPDWITDESGREMFEKI
AGKTTFSARKEVVEALQAAGDMEGEPKPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDE
KLNAELIERGKELNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNENGEVD
YEHPLTPSEDRLPIDPTIDVPEGFDESQRDQPNGFTAEQDIMDTWATSSLTPQIVTRWEE
PGEENQALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLENGCLPWKHAALSGWILDPDHK
KMSKSKGNVVVPNKPIEEFGADAVRYWATSAKLGLDATYDEGQMKIGRRLAIKLLNATKF
ALAIGRENDEHQVLESASADWDFANVTEVLDRSVMAKLASVIRTATDALESYEHSKALEA
IETFFWEFCDDYIELAKNRAYGTAESTGRTPSEAAVKSARTTLGLALDALARLLAPYLPY
ATEEVWSWMHDGEGSVHRASWPCAKAYEAAANGVSADTLAYAGEALATLRKIKSEAKVSM
KTPILQVTLNVAENAYKAVEETLGDVAEAGRVTGEVKLNAVKAADAGDSAADSSSADADS
DATNVNVSVAQSELGEAPAKKK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggataataacacagtaaaacacgcacatttaacgcctcttcttaacaaa
gttggcgttgatggtcttgaagacaagtggcgtagtaattgggacgaagctaagacttac
gcattccataattctcgcgaccgtaaggcagtatattctatcgatactccacctccaaca
gttagtggtcacttgcacgttggtcacgtattctcttacacgcatactgatgtgattgcg
cgatataagcgtatgcaaggttttgacgtgttctacccaatgggttgggatgataacggc
ttgccaacagaacgccgcgtgcagaattattacggtgtgcgagtggatacttcgttgaag
tatgaccctgattttaagccgccttttgaaggcactgaaggcaagaagattgaagctaag
gatcaggttcctgtaagcagacagaactttattgagctttgtgagcgcttgacttctcaa
gatgagaagctttttgaagctttgtggcgtaggcttggtctttctgttgattggtcgcaa
acttatcacactattggcgagcagcctcgccgagttgcacaaaaagcattcttgcgcaat
cttgctcgtggagaggcttatcagaaagacgctccaggcttgtgggatgttacattccag
actgcagttgcgcaggctgagcttgaagcgcgcgaatatcctggcttctaccataagatt
gcgttccgctttgaagatggtacgccaatttatattgaaactacgcgcccagaattgctt
gctgcatgcacttctttgatcgcgcatccagacgacgagcgttacaagaagtactttggt
caggaagtttactcaccgctgtttaaggtgaaggtcccgattttggcgcatcctgcagct
caaatggacaagggcgctggcattgcaatgtgctgcactttcggtgacgtaactgacgtt
gagtggtggcgcgacttgagtttgccaactcgaccaattattcagcgtaacggccgcatt
gtaatgacgactcctgattggattacggacgagtctggccgcgaaatgttcgagaaaatt
gccggcaaaaccacgttctccgctcgcaaggaagttgttgaagctttgcaagcagctgga
gacatggaaggcgaaccaaagccaacaaagcgtatgacgaacttctacgaaaagggcgat
aagcctttggaaatcgtcacttctcgccaatggtacttaaagaacggcggcacagatgag
aagctgaatgctgagcttattgagcgcggtaaggaacttaacttccacccagactttatg
cgcgtgcgctacgagaattgggttcacggcttgaatggtgactggcttatttctcgccag
cgcttcttcggcgtgccattcccactttggtacccagtaaatgaaaatggtgaagtggat
tacgagcatcctttgacgcctagcgaagatcgtttgccaatcgacccaactattgacgtt
ccagaaggcttcgatgaatctcagcgagatcagccaaacggctttactgctgagcaagac
attatggacacttgggctacatcttccttaactccacaaattgtgactcgttgggaagag
ccaggcgaggaaaatcaggctttgtttaaggctactttcccaatggatttgcgtccacaa
ggccaggatattattcgtacatggttgtttagcacggttgatcgcgcgcatctcgaaaac
ggctgcttgccttggaagcatgctgcgctttctggctggatcttggacccagaccacaag
aagatgtctaaatctaagggaaacgtggttgtaccaaataagccgatcgaagagtttggt
gcggatgctgtgcgctactgggcaacttcagcaaaactcggcttggatgcaacttacgac
gaaggccagatgaagattggccgccgccttgcgattaaacttttaaacgctactaagttt
gcgctcgcgattggccgagaaaacgatgaacatcaagttcttgagtctgctagtgcggat
tgggattttgcgaacgttacggaagttttggatcgctctgttatggcaaagcttgcatcc
gttattcgtaccgcaactgatgcgcttgaatcttacgagcattccaaggctttggaagca
atcgaaacattcttctgggagttctgtgacgattacattgagcttgcaaagaatcgtgct
tatggtactgcagagtccactggacgcactccaagtgaagctgctgtaaagtctgctcgc
acaactcttggtcttgcgctcgacgctttggctcgcctgcttgctccttacttgccttat
gctacggaagaagtgtggagttggatgcatgacggcgaaggctctgtgcatcgcgctagc
tggccatgtgctaaggcatatgaggctgctgcaaacggtgtttctgcagacactttagct
tacgcgggcgaggctttggctactttgcgaaagattaagtctgaagcaaaggtttctatg
aagactcctattttgcaagtgactttgaacgtagcagaaaatgcttataaggctgttgag
gagactttgggagacgttgcggaagcgggacgcgttactggagaagtaaagcttaacgct
gttaaggctgcggatgctggcgattcggcggcggattcttcgtctgcagatgcagattct
gatgcaactaatgtaaacgtttctgttgctcaaagcgaactcggtgaagctcctgcaaaa
aagaagtaa
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