Gardnerella vaginalis HMP9231: HMPREF9231_0001
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Entry
HMPREF9231_0001 CDS
T01939
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF9231_0001 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvh03032
]
HMPREF9231_0001 (dnaA)
03036 Chromosome and associated proteins [BR:
gvh03036
]
HMPREF9231_0001 (dnaA)
DNA replication proteins [BR:
gvh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HMPREF9231_0001 (dnaA)
Chromosome and associated proteins [BR:
gvh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HMPREF9231_0001 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
IstB_IS21
AAA
AAA_22
ATPase_2
AAA_14
AAA_23
AAA_16
AAA_28
RNA_helicase
AAA_24
Hda_lid
AAA_19
ATP-synt_ab
LPD38
Motif
Other DBs
NCBI-ProteinID:
AEF31275
LinkDB
All DBs
Position
120..1727
Genome browser
AA seq
535 aa
AA seq
DB search
MSEAFEDPSAQAAIVWSNTLAVLRHNALLSNRDKSWFESVKPEAIFGTTIVLCVSNIETQ
QALQNELSSALLTSLKICTGKDMFPAFKIIQNSEKENNNTLQNVSNTSKTSQSLDNTTNN
NSDSSDSNDSSDPKKVESFLDDSYDSIPVQKDFDYATGLKTMQNTNLNVQSINQKQTNIP
ASVNRDPTTHLNTYATFDTFVPGDSNRFARTVALAVAEGSGRDFNPLCIYGGSGLGKTHL
LNAIGNYALVKDSSLKVRYITSEEFTNEFIEALQNTSQNQGQIANFNRRYREVDVLLIDD
IQFLGGKEATLEQFFHTFNALYQANKRIVIASDVAPKNLRGFESRLISRFESGLTVDIKP
PDLETRIAILRMMASMNGSNVPSDVLDLIAERFTENIRELEGALTRVTAVASLSNQPVSK
ALAEQALQDFFASDIEVRPTDIIGQVAQYFHMTFDEMVGRSRTKNVALARQIAMYLAREM
TSMSLVDIGEVFGGRDHTTVMHAYTRISGEMQEKQEIYNYVMELTVRLKQNPSKK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcctttgaggatcctagtgctcaagccgccatagtatggtctaatactctc
gccgtgttgcgccataatgcacttctaagcaatcgggataaaagttggtttgagagtgta
aaacctgaagctatttttggaacaacaattgttttatgcgtttctaatattgagactcag
caagctctgcaaaacgaacttagttctgctctgctaacttctttgaaaatttgtactgga
aaagacatgtttccagcatttaaaattatccaaaatagtgagaaagagaataacaatact
ttacaaaatgtaagtaatacttcaaaaacttctcaatcgctagataatactacaaataat
aattctgattcgtcagattctaatgattcttctgatcctaaaaaagttgaatcttttttg
gacgattcttatgattcaattcctgtacagaaagattttgattacgcaactggtttgaaa
accatgcaaaatacaaatctcaatgtgcaatctattaatcaaaagcagacaaatatacct
gcatcagttaatagagatccaacaactcatttgaatacttatgccacttttgacacgttt
gttcctggcgattccaatcgttttgctcgcacagtagcattggcagttgcagaaggctca
ggacgcgattttaatcctttgtgtatttacggtggatctggtcttggcaaaacacatttg
cttaacgcaattggaaattatgcgcttgttaaagattcttcccttaaagttcgatatatt
acaagcgaagagtttactaatgaatttattgaggctttacaaaatacaagtcaaaatcaa
ggtcagattgctaactttaatagaagataccgagaagttgacgttctactaatcgatgat
attcaatttttaggtggtaaagaagcaactcttgaacaatttttccatacttttaacgct
ttatatcaggctaataaaagaatcgtaatagcttctgatgttgctcctaaaaatcttaga
ggatttgaatctagacttatttctagatttgaatctggtttaacagtagatattaaaccg
cctgatttagaaactcgtattgctattttacgaatgatggcttctatgaatgggtccaat
gttcctagtgatgttttggatcttattgcggaacgttttactgaaaatattcgcgaactt
gaaggcgctttaactcgtgttacggcggttgcttctcttagtaaccaaccagttagtaag
gctttagctgagcaagctttacaggacttttttgcatccgatattgaagttagaccaaca
gatatcatcggtcaggttgctcaatatttccatatgacttttgatgagatggttggaaga
tcaagaactaaaaatgttgctttagctcgtcaaattgcaatgtatttagctagagaaatg
actagcatgagcttggttgatattggagaagtttttggtggaagagatcataccactgtt
atgcatgcttataccagaattagtggcgaaatgcaggaaaagcaagaaatttataactat
gttatggaattgactgttcgtttgaaacaaaatccttccaaaaaatag
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