Gardnerella vaginalis HMP9231: HMPREF9231_0063
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Entry
HMPREF9231_0063 CDS
T01939
Name
(GenBank) BNR/Asp-box repeat protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00511
Other glycan degradation
gvh00600
Sphingolipid metabolism
gvh01100
Metabolic pathways
gvh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
HMPREF9231_0063
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
HMPREF9231_0063
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
HMPREF9231_0063
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
HMPREF9231_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
AEF32073
LinkDB
All DBs
Position
complement(70116..72839)
Genome browser
AA seq
907 aa
AA seq
DB search
MERRSTKTTSLIEDIADIKGSEHTRFNHATIKITPSSEIKKYSENESGINRKDKNEEINQ
NEGIIGFKFVANSDCDLLDIKPAQKSQATAQQEHTTPIIKISIKEDAPLLSAQNLLEDSA
DANGAKEIALQMEDALGACDGREHDFAITYGSFGSRFYLDGYQCFASATNLGPQRVSEKA
AEVCAAQAESSQIYDFYYSNHLPNPEEIANSSTQAQPDIWFAGPTICARDIKRVSCKSSG
TLHIQFRLRGPGQHGVLFAAGTAGTKTNLESSEKISVYAGPEGIKITLIDYETCVKSVIE
AAASVDDGEWHDLIIRANRGATDIYVDGYSQSHNIGQFWFANIPELNAVSIGEDLRGVRL
MGEARIGGIYFSALTEGQIQRISRAKPLVTTALFDTGYAGSRSYRIPSLVKTRMGTLIAG
ADQRTSVSNDAPNHINFVIRRSTDGGKTWGPLQTVINMPGKNLGKLGASAIDSCPILDPA
GKSERINVLIDINPGGIGLTNCKTAVGVDACGRIKLIDRLGGNYAAAMNGSAAVKLPCDS
SEKECATKWLVFPDGSIKNCDSHNDLRNNSHSNQTCDSSTWNIWKSQEIASESQPLFAEK
TCYIAQIYSDDDGKTWSTPRLIDHMVKEPWMSFAGVCPGNGIVIRQSEKHYGRILVPFYC
SGQSKSHYSSGALISDDGGKTWNRGKMINEGRLINGKIVDPVTMQDDDATSSETVFVERK
NGDILAFFRNQNRSGCVGKAISHDCGETWSELIFDTSLPEIFSQPSATCFNSENADNADC
IAFANASQMMPYRGRGVVRFSYDGGKTWAKNVCINPLHHVYQCLSSSNKRTLQLLWERET
TGIYITAIDSNLWKQDNLQIDFKSNAKSLNNTDLDCIKNKINTSEKMKDLEEGSLTRTER
SQHGRDI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcgttcaacgaagacgacgagccttattgaagatatcgcggatatcaaaggt
tcggagcacacgcgattcaaccatgccacaataaaaattacaccatctagtgaaatcaaa
aaatatagcgaaaacgaatcgggaatcaatcgcaaagataaaaacgaggaaataaatcag
aacgaaggaataatagggtttaaatttgtagcaaattcggattgtgatttattagatatt
aagcccgcgcaaaagtcgcaagcaaccgcacaacaagagcacacaactccaataataaaa
ataagtattaaagaagacgctcccctgcttagtgcacaaaatcttttagaagatagcgcc
gacgcaaacggtgcgaaagaaattgcactacaaatggaagatgcgctaggcgcatgcgac
gggcgcgaacacgattttgcaataacgtacggaagttttggaagccgattctatttagac
ggataccaatgctttgcgagcgcaacgaatcttgggccgcaaagagtgagcgaaaaagcg
gccgaagtgtgtgcagcgcaggcagaatcttcgcaaatctacgacttttactactcaaac
cacttgccaaatccagaagaaatcgcaaattcgtccactcaagcacagccagacatatgg
tttgcaggacctacgatttgcgcaagagacataaaacgcgtatcttgcaagtcgagcgga
acgctgcacattcaatttagattgcgaggccctggccaacatggagtgctttttgctgct
ggaactgctggaacaaaaactaatctagaatctagcgaaaaaataagcgtgtacgcagga
ccagaaggcataaaaatcacgctaatcgactacgaaacgtgtgtaaaaagcgtaatcgaa
gcagccgcaagcgttgacgacggcgaatggcacgacttgattattcgcgcaaatcgcgga
gcaaccgacatttacgtagacggatacagccagtcgcacaacataggacaattctggttt
gcaaacataccagaattaaacgccgtaagcattggcgaagacttgcgcggagtgcgacta
atgggcgaagctagaataggcggaatctactttagcgcactaaccgaaggacaaatccaa
agaatatcaagagcaaaaccgcttgtaacaactgcactatttgacacgggatatgcgggc
tctcgcagctacagaataccgtcccttgtaaaaacgcgcatgggaacgctaatcgcagga
gcagaccagcgaacaagcgtttcaaacgacgctccaaaccacataaactttgtgattcgc
agatccacagatggcggaaaaacgtggggtcctttgcaaaccgtgatcaacatgcctggc
aaaaaccttggaaaactaggcgcgagcgcaatcgattcctgccccattttagatccagcg
ggaaaaagcgaaagaattaacgtattaatcgacattaatcctggcggaattgggctaaca
aattgcaaaaccgctgtaggcgtagacgcgtgcggaagaatcaagcttatagaccgctta
ggcggcaactacgcggcggcaatgaacggaagcgcagccgtaaaattgccatgcgattct
agcgaaaaagaatgcgcaacaaagtggctagttttcccagacggaagtataaaaaattgc
gattcgcacaatgacttacgcaataactcgcacagtaatcaaacttgcgacagttccacg
tggaacatatggaaatcgcaagaaattgcaagcgaaagtcagccattatttgccgaaaaa
acgtgttatatagctcaaatctactcggacgatgacggaaaaacatggagcacgccacgc
ttaatcgaccacatggttaaggagccatggatgagcttcgctggagtatgcccagggaac
ggaatagttattagacaaagcgagaaacattacggcagaatacttgtgccattctattgc
agcggccaaagcaaatcgcactattcttcgggagcgcttatttcggacgacggcggaaaa
acatggaaccgaggcaaaatgattaacgaagggcgattgatcaacggaaaaatcgtagat
cctgtaacaatgcaagacgacgatgcaacaagctccgaaaccgtgtttgttgagcgcaaa
aatggcgatattctggctttcttccgcaatcaaaatcgctcgggatgtgtaggcaaagcc
attagtcatgattgcggagaaacttggagcgagctaatttttgacacaagtttgccagag
atattcagccagccgagcgcaacctgttttaacagcgaaaatgcagacaacgcagactgc
atagcgtttgcaaacgcaagccaaatgatgccttatcgcggtcgcggagttgtgagattt
agctacgacggcggaaaaacatgggcaaaaaacgtgtgcataaacccattacaccacgtt
tatcaatgccttagctctagcaataaacgaactttgcaactactgtgggaaagagagact
actggaatttatataacagcaatagattccaatctttggaagcaggataatttacaaata
gattttaaaagcaatgcaaaaagtttaaacaatacagacttagattgtataaaaaataaa
ataaacacaagtgaaaaaatgaaagatttagaagaaggaagccttacgcgaactgaaagg
agccaacatggaagagacatttag
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