Gardnerella vaginalis HMP9231: HMPREF9231_0078
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Entry
HMPREF9231_0078 CDS
T01939
Name
(GenBank) sugar-binding domain protein
KO
K10439
ribose transport system substrate-binding protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_0078
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HMPREF9231_0078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_0078
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HMPREF9231_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
PA
Motif
Other DBs
NCBI-ProteinID:
AEF31303
LinkDB
All DBs
Position
90442..91380
Genome browser
AA seq
312 aa
AA seq
DB search
MNYLVMRRGMKLACAVAAASALVFSMSACGNASSSDKVALLVSTLNNPFFVDLRDGAQAE
AKKLGVDLQVSDAQNDSSKQQDQAQNAQSQGAKAVIINPVDSDAAGPAVAPLLSSGMPVI
SVDRSVTGEKVTSHIASDNVAGGAQAADALAKSMGEKGEVLILQGIPGAASTRDRGKGFK
DRIKKYPNIKVVAEQTANFDRAEALNVATNLLQSHPNAAGIYAENDEMALGAIQSLGAKA
GKDVKVVGFDGTADGMKAIKAGTMAGTIAQQPKELGRSAVAAAVKAIKKQTVPKTEPITV
KTVTAKNVADFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaattatctagttatgcgccgtggtatgaagctcgcttgtgctgttgcagcagcatcg
gctcttgttttcagcatgagtgcgtgtggaaatgcaagctctagcgacaaggttgcgctg
ttagtgtctacgctaaataatccattctttgtggatttgcgtgatggtgcgcaagcggaa
gccaagaagctgggagttgatttacaggtttcagatgctcagaacgattcttctaagcag
caagatcaggctcaaaacgcgcaatctcaaggtgctaaagcagtaattataaatcctgtg
gattccgatgctgctggcccagccgttgcgccacttcttagctctggtatgcctgtgatt
tctgtggatcgttccgtaactggcgaaaaagttacttctcacattgcctccgataacgtg
gcaggaggtgctcaagctgccgatgcgctcgctaagagcatgggagaaaagggcgaagtt
ctaattttgcaaggcatcccaggtgctgcttctacgcgagatcgtggcaaaggttttaag
gatcgcattaagaagtatccaaatattaaggttgttgcggagcagactgctaactttgat
cgtgctgaggcgttgaacgttgcaaccaacttgttgcaatctcatccgaacgcagctggc
atttacgccgagaatgacgagatggcattaggtgcaatccaatcattaggtgctaaagct
ggtaaagatgttaaagtagttggcttcgatggtactgccgatggcatgaaggccattaag
gctggaacaatggctggcactattgctcagcaaccaaaggagcttgggcgttctgccgtt
gctgcagctgtaaaagctattaagaagcaaactgttccaaagactgagccaattactgtg
aaaacagttacagcaaagaatgtagctgatttcgagtaa
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