Gardnerella vaginalis HMP9231: HMPREF9231_0099
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Entry
HMPREF9231_0099 CDS
T01939
Name
(GenBank) efflux ABC transporter, permease protein
KO
K02004
putative ABC transport system permease protein
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_0099
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
HMPREF9231_0099
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Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
Dit_N
Motif
Other DBs
NCBI-ProteinID:
AEF31054
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Position
112542..113753
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AA seq
403 aa
AA seq
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MIMLLKDLRLSPMRSFLTGFSMFIGIIAVIASVLIGTVGKDYLIATNEQLNGRRPTYEIT
FSAQNFDEYSVFNKFLNRIESANRNANVMLQTNTGLLFSASMPASKSVKISKEYKTGNLQ
YADAVYTTAGYNKVYNLPIVSGRWFSNSAKSNALEMVVNQSASKRYKIGEVAFITSRKTT
QMSPIRIVGVVNDGVDSAKVYVNILGLLRYAPTLWEYSGKEAQGSIYWLNKENRSQKSIK
SYVSDALYDCCGGQVNEIRRHDNSDDYENVITVLQLSFAIVAALLLFVSALGLINIGLAS
LEQRTHELLIRRALGATRWSIASLVLGSAIILALIVSIAAVAVSFGLVSIASSFWDAASP
VSPPVYPYEAAIGAVIAAFITALAGSVVPAIKASRLQPALALR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgctgcttaaagatttgcgcctgtctcctatgagatccttcctcacaggtttt
tcaatgtttatcggcatcattgccgttattgcgtcagtgcttatcggcacggttggtaag
gactatcttattgcaactaacgaacagctaaacggtcgtagaccaacatacgagattact
ttttcagcacaaaattttgacgaatattcagtatttaacaaattcttaaatcgcattgaa
tccgcaaaccgtaacgctaacgttatgctacaaacaaacactggactactgtttagcgct
tctatgccagcctcgaagagtgtaaaaataagcaaagaatataagactggcaatcttcaa
tatgctgacgctgtttacactacggcaggatacaacaaagtttataacttacctattgta
agtggaagatggtttagtaatagcgctaaaagcaacgcattagaaatggtagtaaaccaa
tctgctagcaaaagatacaagattggtgaagtagcatttattacttctcgcaaaacaaca
caaatgagtcctataaggattgttggagttgtgaacgatggcgtagactcagcaaaagta
tacgtgaatattctaggattattacgttatgctccaactctttgggaatattctggaaaa
gaagctcaaggctcaatctactggttgaataaagaaaatcgttctcaaaaatcaattaaa
tcttatgtttcagatgctctttacgactgttgtggtggacaagtaaacgaaattagaaga
catgataatagtgatgattacgagaatgttataacagtattgcaattaagttttgctatc
gtagcagcattattactttttgtttccgcgctaggtttaatcaatattggtttagcatcg
ttggagcagcgcacacatgaactgcttatacgcagagccttgggtgctactagatggtct
attgcttcactcgtgttaggaagtgcgattattttagcgctgatagtttcgattgctgct
gtcgctgtttcttttggacttgtgtctatagcatcaagtttttgggatgcagcaagccca
gttagtccgccagtttacccatatgaagccgctattggagctgttattgcggcttttatt
acagcgcttgctggaagtgtggtgccggcaataaaagcatcacgtttacaaccagcatta
gcattgcgttaa
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