Gardnerella vaginalis HMP9231: HMPREF9231_0121
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Entry
HMPREF9231_0121 CDS
T01939
Name
(GenBank) M protein repeat protein
Organism
gvh
Gardnerella vaginalis HMP9231
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF745
Motif
Other DBs
NCBI-ProteinID:
AEF31050
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Position
complement(137707..140352)
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AA seq
881 aa
AA seq
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MNAKIAAAISLGASSLALIGSISIANAANAADATTTDTSHNPTAHVKTISDTGFNAVSNV
VSYGPEDFKPQTVNSPVTGDAAAGKQEKENPGTVQGSGTPKNNTPANAEILQKVEESKNL
QKEAQNKHNEANKAVEEAKQEAEDTARKINEAVEKKNNAENSIAETNKKIETETQNIANA
EQRIEEKSKAVKEAEKDKKVTDEAKQNADQVNKIRSEEKAAKDELAEDAKDDNEETAEDL
ANEEEAKSKLEAELAEDRKNVEQVKSDAEKAEKTAAKGKDAETNLNKINSNLKKLTEELN
EAKNNKETNSSKIAELKKNVEKANESVSNAKKDAEEKKRKYDLQQEKVNTLEKQLQELEK
DTSKLGNSEHAEKINKITQEKLTESDAAEKLKSELDNATRTLQEETTKANKAEQDLMEAN
KNNDAINEISDAIKELTSEKEYNDKIVFEAGEAKELASKKKTEAEKLAKNIKEKELKLQE
YEKTIAELRESKQDAEKDLNVASRDAEKAKEAAENAAQNLLAITEEAQKAEKKVQDEKAN
FENAKMDKDTAEKNLNQLKEDLKRIDKEISEAKTNVEATKQLAETAKQKLNEAKTNVEAT
KAKILELKASIEETKRTLISKYAASSQTIEFAFDLMIKEVANRSKELDKSTQTLNDVEKS
LTAAKQKAEESLNPQVQKPAPSTPAPSTPAPSTPAPAPAPAPAPSTPQSAPQNNAAPSAP
QASAPSVSQSAPQAAPKHSAVPANQTESMHTAKAAEELVENATAKSPATAETPARTPRAA
ASAAPAAPTASSANTTKSEESKNTSNDSAKDENQKESEESKNEDSKSEDNSSDKSAQASG
ANNGEHAAGNNTTLIAAVAGSITAGIAAIGAGWHFMRIRRK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaagattgcagccgctatctctttgggcgcaagctctttggctcttattgga
agcataagcattgcaaacgctgccaacgcagccgacgcgactacaacagatacgtctcac
aatccaacagcacatgttaagacaatatccgacactggttttaatgctgttagcaatgtt
gtgtcttacggtccagaagattttaaaccacaaaccgttaactcgcctgttactggcgac
gctgctgccggcaagcaagagaaagaaaatcctggaacggttcaaggttcaggcacacct
aagaataacactccagcaaatgcagaaatactccaaaaagtcgaagaatcaaagaatcta
caaaaagaagctcagaataagcataatgaagcaaataaagctgtagaagaagcaaaacaa
gaagctgaagatactgcaagaaaaattaatgaagctgtagaaaagaaaaataatgcagaa
aatagcattgctgagaccaataagaaaatagaaacagagactcagaatatagcaaatgcc
gagcagcgcattgaagagaagagtaaagccgtaaaagaggcagaaaaagacaagaaagtg
actgatgaggctaagcaaaatgctgatcaagtaaacaaaattaggtctgaagaaaaagct
gcaaaagatgaacttgctgaggacgcaaaagatgacaacgaagaaactgcagaagattta
gcaaatgaagaagaggctaaatctaagcttgaagcagagttagctgaagatagaaaaaat
gttgaacaagtaaaatcagatgctgaaaaagcagaaaaaaccgctgccaaaggtaaagac
gctgaaactaatcttaataaaatcaattcaaatcttaagaaactaacagaagagttaaac
gaagctaagaataataaagaaacaaactccagcaaaatcgcagagttgaagaaaaatgtt
gaaaaagcaaatgaatctgtttcaaatgctaaaaaggatgcagaagaaaagaaacgtaaa
tatgatttacagcaagagaaagtaaatactcttgaaaagcagctacaggaattagaaaaa
gatacttctaaacttggcaactctgagcatgctgaaaaaatcaataaaataacacaagaa
aaactaactgaaagcgatgcagcagaaaaacttaaatcagagttagacaatgctactcgt
acgcttcaagaagaaacaacaaaagctaataaagctgagcaagatctgatggaagcaaac
aaaaacaatgacgctattaatgaaatatcagatgcaattaaagagttaacttctgaaaag
gaatacaatgataagattgtatttgaagccggtgaagcaaaagaacttgcatctaaaaag
aagactgaggctgaaaaattagctaaaaatattaaagaaaaagaattaaagttacaagaa
tacgaaaaaacaatagccgaattacgcgaatctaaacaagatgctgaaaaagatctaaac
gtcgctagcagagatgcagaaaaagctaaagaggcggcagaaaatgctgctcaaaactta
ctggcaataacagaagaagcacaaaaagcagagaaaaaagttcaagatgaaaaagctaat
tttgaaaacgctaaaatggataaggataccgccgaaaagaatcttaatcaactgaaagaa
gacttgaagcgaatcgataaagaaatatccgaagctaaaactaatgtcgaggcgactaaa
caacttgctgaaacagcaaagcaaaaactaaatgaagcgaaaactaatgttgaagcaact
aaagcaaagatcttagagctaaaagcttcaattgaagagaccaagcgtacacttatttca
aagtatgctgcaagctcccaaaccatcgaattcgcttttgatttaatgataaaagaggtt
gctaatcgatctaaagaacttgataaatcaacacaaacgttgaacgatgtggaaaagagt
ctcactgcagcaaagcagaaggctgaggaatctttgaatccacaggttcagaagccagct
ccttctacaccagctccttctacaccagctccttctacaccagctcctgctcctgctcca
gctccagctccaagcactccacagtctgcgccacagaacaatgctgcaccaagtgcgcca
caggcttcggctccttctgtatcacagtctgcgccacaggctgcacctaagcacagtgct
gttccagcgaaccaaacggagtccatgcataccgcaaaagctgcagaagaactcgtagaa
aatgctactgctaagtcgccagcaaccgcagagactcctgcacgcacgcctcgtgctgca
gcatctgctgctcctgctgctcctacagcaagctccgcaaacacaacaaagagcgaagag
tccaagaacacatctaacgattccgcaaaagatgaaaatcagaaggaatccgaagagtcc
aagaacgaagactcaaagagcgaagacaatagcagcgataagagcgctcaggcatctggc
gcaaacaacggtgagcacgccgctggcaacaacacaacgctaatcgcagctgttgctggc
agcataactgctggaatcgcagcaatcggcgcaggatggcactttatgcgaatccgtcgc
aagtaa
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