Gardnerella vaginalis HMP9231: HMPREF9231_0275
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Entry
HMPREF9231_0275 CDS
T01939
Name
(GenBank) Beta galactosidase small chain
KO
K12111
evolved beta-galactosidase subunit alpha [EC:
3.2.1.23
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00052
Galactose metabolism
gvh00511
Other glycan degradation
gvh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
HMPREF9231_0275
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
HMPREF9231_0275
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
HMPREF9231_0275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
Glyco_hydro_2_N2
LacZ_4
Motif
Other DBs
NCBI-ProteinID:
AEF31676
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All DBs
Position
302934..305951
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AA seq
1005 aa
AA seq
DB search
MVESVNDWENPSLTGKNRLPARAYFLSYECSSLAKTYKREFAHGYVCLNGKWKFALLKSP
NSVRKYMKTELQSNWDEVNVPHMWQFDGYGQLQYTDEAFPFPVDPPRVPTLTPTAVYQKE
IIISSIDDDEEIILRCDGIESYGEVYLNGRYVGMTKGSRLSAEFDITEAVVEGTNLFAIV
VMQYCDGTYLEDQDMWWASGIFRDIYVYRRPKVHLKDFFARTHLLDDGRACLSFDATISG
TSSFSCSIEDNGIVVSRIEQKVPNGEVHTKMYIDNPHLWNPEDPYLYDMVITVTSDTGSN
EVVSHRLGLVEISIKDGLMYLNGKYFVMHGVNRHDFDQNKGRAIDIADVKHELIMMKQHN
INAIRTSHYPNDPRFYQLCDELGFMVVAETDLECHGFEHVGNISMISDDSDWQIAYVSRI
EREVFQERNHACIVMWSLGNESGFGCNFRAMYHRCKELDPTRPVHYEEDRFGEVVDVLST
MYSRVSQMNDFGEHPTKKPRILCEYAHSMGNGPGGLQEYQEVIDCYPSIQGHFVWEWCDH
GIAQVDSQGRSYNAYGGDFHDYPNDGNFSIDGLVFPWKAASPGLLEYKQVLCPVHVDLDG
EYIVITNKRYFTDLDDIRIDLSLSENGHAIYNTTISPGELHPSNTIRVKLNIPKLGSNVG
ELLITAYVYSLYRYWWNDEHSPLGVYQYCYRVGNIELPCSQEKCSVFRPDIKVDEDYITI
TSKSQKYVFDRISGDLIHWYNASHDMIKTPIHFDIWRPLIDNYRQEYNELWKPNFLDIMQ
LDTRSVNWKSCDDIAEVTVEQRFAPPVLSFGMKLNSRYVVNSSGVLNLEICAEAYGSYKD
IIPRVGLTFAMPREYDNITWYGRGPGETYPDSCSSQVVGLWEASVDDMITPYVRPQDYGN
HQNTRWVSVRNSSGVGILVTRLSSSSMTDGFSYSAWPFTSNTIEQAKHRNELHEDDLVTI
NLNDQILGLGSNSWGSEVLDSHRIRFENCNFAFSFMPICDNATMD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaagtgttaatgattgggagaacccttcgttgactggtaaaaatagattaccg
gctcgagcatattttttaagttatgagtgttctagtttagcaaaaacttataagcgtgaa
tttgcgcatggatatgtatgtttaaatggaaaatggaaatttgcattattgaaaagtccc
aattctgtccgaaagtatatgaaaacagaattacaatccaattgggatgaagtaaatgtt
cctcatatgtggcagtttgatggttatggtcaactgcaatatactgacgaagcatttcct
tttcctgttgatcctcctagagttccaactttgactccaacggctgtttatcagaaagaa
ataataatttcatctattgacgatgatgaagagattattttgcgttgcgacggtattgaa
agttatggtgaagtctatctaaatggcagatatgttggaatgacaaaaggatcacgtctt
tctgctgaatttgatattactgaagccgtagttgaaggcacgaatttattcgctatcgtt
gtaatgcaatattgcgatggaacgtatcttgaagatcaagatatgtggtgggctagtgga
atttttcgtgatatatatgtatatcgtagaccaaaggtacatttgaaagatttcttcgct
cgcactcatttattagatgatggtagagcctgtttatcttttgatgctacaataagcgga
acttcttctttttcatgcagtattgaggataacggtattgtggtttcgcgtattgagcaa
aaggttccaaatggagaagtacatacaaaaatgtatattgacaatccgcatctttggaat
cctgaagacccatatttatatgacatggtaattactgttacaagtgatactggatctaac
gaagttgtgtcgcatcgtcttgggctcgttgaaataagcattaaagatggtctcatgtat
cttaatggtaaatattttgttatgcatggagttaatcgtcatgattttgatcagaataaa
ggtcgtgctattgacattgctgatgtgaaacatgagcttataatgatgaaacagcataat
ataaatgcaatacgcacttctcattatcctaatgatcctaggttttatcaattatgtgat
gagcttggttttatggttgttgctgaaactgatctcgaatgtcatgggtttgaacatgtt
ggtaatatctccatgattagtgatgattctgattggcaaatagcttacgtgtcacgcatt
gaacgtgaagtgtttcaagagcgtaatcatgcgtgtattgttatgtggtctcttggtaat
gaatctgggtttggatgtaatttccgggctatgtatcatagatgcaaagagcttgatcca
acgcgacccgtacattatgaggaagatagatttggcgaagttgttgatgttctttcaact
atgtattcgagagtttctcaaatgaatgattttggtgagcatccaacaaaaaagccaaga
atattgtgtgaatatgcacattctatgggcaatggtcctggtgggttacaggaatatcag
gaggttattgattgttatcctagtattcaagggcattttgtttgggaatggtgtgatcat
ggaattgctcaagttgattcgcagggtcgttcatataatgcgtatggcggagatttccat
gattacccaaatgatggcaactttagcatcgatggtcttgtttttccatggaaagcggca
agccctggtctattagagtataaacaggttttatgtccagttcatgtagatttagatggt
gaatatatagttataaccaataagcgttattttactgaccttgatgatattcgtattgat
ctctcattgagtgagaatggtcatgccatctataatacgactatctctccaggagagtta
catccttctaatacgatacgtgtgaaattaaatattcctaaactaggttcaaatgttgga
gagttattaataactgcttatgtttatagtttgtatcgttattggtggaatgatgagcat
tctccgcttggcgtatatcagtattgttatagggttggtaatatagaactaccatgttcg
caagaaaaatgttctgtatttcgaccagatattaaagttgatgaagactatattactatc
acatcgaaatcgcagaaatatgtgtttgacagaatttctggtgatctcatacattggtac
aatgcttcccatgatatgattaaaactccgattcattttgatatttggcgacctcttatt
gataattatcgacaagagtacaatgaattatggaagcctaatttcttagatattatgcaa
ttagatactcgttccgttaattggaagagttgtgatgatattgctgaagtcactgtagaa
cagagatttgctcctcctgtgttatcgttcggaatgaaattaaatagtaggtatgttgta
aattcgtctggagtgcttaatcttgaaatatgcgctgaagcttatggtagttataaagat
attattccgcgtgtgggattaacttttgctatgcctcgagagtatgacaatattacttgg
tatggtcgtggtccgggtgaaacatatccagattcttgtagttctcaagttgttggactc
tgggaagccagtgtcgacgatatgataactccatacgttcgtccgcaagattatggaaac
catcaaaatacgcggtgggtatctgtgcgtaatagtagtggggtaggtattttagtaacg
cgtttgtctagtagttctatgactgatggattctcttattctgcttggccgtttacttcc
aatactattgaacaggcgaagcatagaaatgaattacatgaagatgatcttgttacaata
aatctcaatgatcaaatattgggtttgggatctaactcatggggcagtgaggttttagat
tctcatagaattcgttttgagaattgtaatttcgctttttcctttatgcctatttgcgat
aatgcaacaatggattga
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