Gardnerella vaginalis HMP9231: HMPREF9231_0280
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Entry
HMPREF9231_0280 CDS
T01939
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02056
simple sugar transport system ATP-binding protein [EC:7.5.2.-]
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_0280
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative simple sugar transporter
HMPREF9231_0280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
AAA_15
AAA_29
SMC_N
Rad17
MukB
AAA_28
AAA_30
AAA_27
AAA_19
Zeta_toxin
RsgA_GTPase
Lmo0850
Motif
Other DBs
NCBI-ProteinID:
AEF31351
LinkDB
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Position
310594..312165
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AA seq
523 aa
AA seq
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MRLKAMNIFKSFGGVHALKNINFDISSGEVHCLAGGNGCGKSTIVKILSGVLRPDSGSIE
VDGENYSALTARQAIDLGIAVIHQDLSLFNTMTVKDNICLPEQVHHRRFFINNSLADKVA
KEALERIGANINCYERVENLSMAARQQVAIARALVLNAKVIFMDEPTTALTYSEVEELLK
TIENLKLNGVSVVFISHKLDEVFSVADRITVFRSGELVGTYNAKDLNPRKLSSLMIGHDV
QFGIPNNYDMNKEVVPTLNMEDVKASRVNGVTLSVNPGEVVGFSGLLGSGRTETALALFG
LNHITSGSVKINGKIVDINNPRDAIERGIALVPEDRYKQGLFQDSNLLSNCASAILSRIS
NCFGIVNQNEEKIVGDEILNDLQVNTHDLSLLAKSLSGGNQQKVLLGKWVATNPKLLILD
SPTVGVDVGSKSQIYQIIRRLAEKGISVIVISDEEEELLAVCNKIYIFKQGKVSTQITGD
ELEPGFSKIFRESTDRDNSHESNESFISSSDKSVSFVQNGGAL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctaaaggcaatgaatatttttaaaagttttggtggagtgcatgctttaaaaaat
attaattttgatatttctagtggtgaagttcactgcttagctggtggcaatggatgcggt
aaatcaacgatagttaagattttatccggagttttgcgacctgattctggaagtattgaa
gttgatggtgagaattattctgctttaactgctagacaagcaatcgatctcggtatagct
gttattcatcaggatttatcattgtttaacacgatgacggtaaaggataatatttgtttg
ccagagcaagtccatcaccgcagattttttataaataattctttggctgataaggttgca
aaagaagcactcgaacgtataggagctaatattaattgttatgaaagagtagagaattta
tcaatggctgctcgtcagcaggtagctattgctagagcattagtgcttaatgcaaaagtt
atttttatggatgaacctactactgctcttacttattcagaagttgaagaattattgaag
actatagaaaatctaaaattgaatggagtttctgtagtctttatatcgcataagcttgat
gaagttttttctgttgcagatagaatcacagtatttagatctggtgaattagttggaact
tataatgcaaaggacttaaatcctagaaaattatcttctcttatgattggtcatgatgtt
caattcggtattcctaataattatgacatgaacaaggaagttgttccaacattaaatatg
gaagatgtaaaagcttctagagttaatggcgttactttgagtgtaaatcctggtgaagta
gttggatttagtggattgcttggttctggcagaacagaaacagcacttgctctatttgga
cttaatcatataactagtggttctgtgaagattaatggaaaaattgttgatataaataat
cctcgtgatgctatagaaagaggtatcgctttagttcctgaagataggtataagcaaggt
cttttccaagatagtaatcttttaagtaattgtgcttctgcaattttgagtaggatatct
aactgttttggaattgtaaatcaaaatgaagaaaaaatagttggggatgaaatcctcaat
gatttgcaagttaatacacatgatctcagtttgttggctaaatctttatctggaggtaac
caacaaaaagttcttttaggtaagtgggttgcaactaacccaaagctgttgatattagat
tctccaaccgttggtgttgatgttggatctaaatctcaaatttatcagatcatacgcaga
ctagctgagaaaggcatatcggttatagttatatctgatgaggaagaagagctccttgct
gtttgcaataaaatttacatttttaaacaaggaaaagtttctactcaaataactggtgat
gaattagaacctggattttctaagattttcagggaatctacagatagggataattctcat
gaatccaatgagagttttatatcttcttcagacaaatctgtttcttttgttcaaaatgga
ggtgcgttgtga
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