Gardnerella vaginalis HMP9231: HMPREF9231_0291
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Entry
HMPREF9231_0291 CDS
T01939
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvh03000
]
HMPREF9231_0291
Transcription factors [BR:
gvh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HMPREF9231_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_7
HTH_Tnp_ISL3
HTH_38
HTH_IclR
HTH_26
Phage_int_SAM_2
Motif
Other DBs
NCBI-ProteinID:
AEF31647
LinkDB
All DBs
Position
complement(323043..324029)
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AA seq
328 aa
AA seq
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MSIVQVARRANVSTSTVSRYLHGTLNVEDSTAQRIDEAAHFYKYTTKINSKTTYKALALV
IPGLNNPFYSELCQQLSMAADGLGYTLNIKISQGNPIKERNIVESIIKEQKYIGLIYAGL
NNNNIALRKVIPSGMNAVLIDEQMNDEKLSNISTVTVDNYSGAYQAVCYLLSLGHKRIAY
VSGPDGLSTTSDRKHGYLSALSNSKILYDDSLIFSGPYTEEFGESIFPYIVSNPDPPTAI
FCSSDISALGLLGAAERYGLKIPDDLSVIGCDGIHIGKWAHPSLTTLQQPFEAIAKSTLE
LISFNGETKHIQLPLTLTIRNSTCRIKN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgttcaagtggctagaagagcaaatgtatctacatctaccgtatcgagatat
ttgcatggtacgttaaacgtagaagactctacagcacaaagaattgacgaggctgcacat
ttctataaatacacaactaaaataaactcaaagacaacttacaaagcactggcgcttgtt
attcctggattaaataacccattttatagtgaactatgtcaacaactatccatggcagca
gatggtttaggatatacattaaatattaaaatatcgcaaggaaatccaataaaagaaaga
aatattgttgaatccataattaaagagcaaaagtatattggacttatatacgctggatta
aataacaataatatagctttgcgtaaagtaataccttctggaatgaatgccgttctaata
gatgagcaaatgaatgatgaaaaattatctaatatatcaacagtaactgttgacaattac
tctggagcataccaagctgtctgttatttactttccctggggcataagagaatagcctac
gtgtcaggaccagatggattaagcacaacctcagacagaaaacatggctatttatctgct
ttatcaaatagcaaaatattatacgatgattctttaatattttctggtccatatactgag
gaatttggagaaagtatattcccatacatagtaagtaacccagatccaccaaccgcaata
ttctgtagctcagatatttcagcactagggttacttggagcagctgaaagatatggatta
aagataccagatgatttatctgtaatagggtgcgatggaattcatattggcaaatgggcg
catcctagcttaacaacattgcagcaaccatttgaagctattgctaaatctactttagaa
ttaataagttttaatggagaaacaaaacatattcaattaccattaacgttaactattaga
aattctacttgcagaataaaaaattag
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