Gardnerella vaginalis HMP9231: HMPREF9231_0304
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Entry
HMPREF9231_0304 CDS
T01939
Name
(GenBank) carboxyl transferase domain protein
KO
K01966
propionyl-CoA carboxylase beta subunit [EC:
6.4.1.3
2.1.3.15
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00280
Valine, leucine and isoleucine degradation
gvh00630
Glyoxylate and dicarboxylate metabolism
gvh00640
Propanoate metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
gvh01120
Microbial metabolism in diverse environments
gvh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMPREF9231_0304
00640 Propanoate metabolism
HMPREF9231_0304
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HMPREF9231_0304
Enzymes [BR:
gvh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
HMPREF9231_0304
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
HMPREF9231_0304
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Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
OLD-like_TOPRIM
Motif
Other DBs
NCBI-ProteinID:
AEF31803
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All DBs
Position
339012..340658
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AA seq
548 aa
AA seq
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MSALTKDTAQVAKDVNKKDVNKDAKTMQNAQPTQPQRGKSAVEHAARLARDAEQNALERQ
HAKGKSTARERLDLLFDTGTFEEIGRFNGGDINNDIAGCAVITGFGEVYGKKVAVYAQDF
SVRGGTLGRAEGQKICHLLDMALQLAVPVVALIDSGGARIQEGVNALTQYGRIFKKTCEA
SGLIPQISLILGPCAGGAVYCPALTDFIIMTREHSNMFVTGPDVVKAATGESISMDDLGG
GYVHNSTSGVAHYLGEDEADAIDYARTILAYLPQNCNQNPPTFAYAATRADRETAKQLAT
IVPSNDRQPYDVLDVIRAIVDYGEFVQVQELYAASAVVGFACIEGHPVGIVANQPKVNAG
ILDVNSSEKVARFVRLCDAFNLPVVTLVDTPGYKPGSDQEHAGIIRRGAKVIYAYANAQV
PLVTVILRKAFGGAYIVMGSKSMGADFNYAWPTSQIAVLGAQGAVNIIHRKDLQKAKERG
QDVDALRKKLVENYENTTVNANLSLETGQIDAMIDPEQTRDVIANSLKILRSKKRVSRTG
KHHGNQPM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcttactaaagatactgcacaagttgcaaaagatgttaataaaaaagatgtt
aataaagacgcaaaaactatgcaaaatgcgcagcctacgcagcctcagcgtggaaaatca
gccgtagaacacgcggctcgccttgctagagacgccgagcagaatgctttagagcgccag
catgcaaagggaaaatccacagcaagagagcgtttggatttgctttttgatacgggaacg
tttgaagaaatcggccgctttaacggtggagacataaataacgatattgcaggatgcgct
gtaatcacgggctttggcgaagtatacggcaaaaaagtggcagtttatgcgcaggatttt
tccgttcgtggcggcacgcttggacgcgctgaaggtcagaaaatttgtcatcttctagac
atggcgttgcagcttgcagttccagttgttgcgctaatcgactcgggcggcgctcgcatt
caagaaggcgttaacgcacttacgcaatatggcagaatcttcaaaaaaacttgtgaagca
agcggtttaattccgcaaatctcactaattcttggaccttgcgctggtggtgcagtttat
tgccctgctcttacggattttataatcatgactcgcgaacattccaacatgtttgtaact
ggtccagatgttgttaaggctgccacaggcgagtcaattagcatggacgatttaggcggt
ggatatgtgcataactccacttcgggcgttgctcactacttgggcgaagacgaggcggac
gccattgactatgcgcgcacaatcttggcttatttgccgcaaaattgcaatcaaaatccg
ccaacattcgcatacgctgccacgcgcgcagacagagaaaccgctaagcagcttgcgact
attgttccaagcaatgatcgccagccgtacgacgttttagacgttattcgcgcaatcgta
gattatggcgaatttgtgcaagttcaagagctttacgcagcatccgcagtagtcggtttt
gcttgcatagaaggtcatcctgttggaatagtggcaaatcagcctaaagtcaatgctgga
attctagacgttaattcttccgaaaaagtagcgcgatttgtgcgattgtgcgacgcgttt
aatcttcctgttgtaactcttgtagacactcctggatacaagccagggtcggatcaggag
cacgcgggcattattcgcaggggagcaaaagtgatttacgcgtacgcaaacgcgcaagtt
ccgcttgtcactgtgattttacgcaaagcttttggtggagcatacattgtaatgggctca
aagtctatgggtgcagactttaactacgcttggcctactagccagatagcggttttgggt
gctcaaggagctgtgaacattattcatcgcaaggatttgcaaaaagcaaaagagcgcggt
caagatgttgacgctttaagaaaaaagcttgttgagaattacgaaaataccactgtaaac
gcgaatctttctctggaaactggccagattgacgcaatgatagatccagagcaaacaaga
gatgttattgctaattctttgaagattttaagaagtaaaaaacgtgtttcgagaacaggg
aagcatcatggaaaccagccaatgtga
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