Gardnerella vaginalis HMP9231: HMPREF9231_0308
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Entry
HMPREF9231_0308 CDS
T01939
Name
(GenBank) LPXTG-motif cell wall anchor domain protein
KO
K20276
large repetitive protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9231_0308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib
RibLong
GspA_SrpA_N
Big_6
bMG3
PUA_3
DUF4625
CarboxypepD_reg
Bact_surface_Ig-like
Gram_pos_anchor
CMD
Motif
Other DBs
NCBI-ProteinID:
AEF30910
LinkDB
All DBs
Position
complement(358188..367751)
Genome browser
AA seq
3187 aa
AA seq
DB search
MANNNRKKHAREQVESSFKNVDSSSAYATMRKVSLSTLATVLTAATCLGGQPILASSNIL
LPPTTAAFAQEVRNADPTPWLHTPNILEFQRYRFANSNGTIGQIGSDGLGDYSNTTKKSD
MYAHLEENNGAKYLVFDVFFNNDGKDMTGASKQQQYVWQIPFAVADLNNGYYNGDTLSDL
SFDFYKRNGTSPQTTNAVLSRDFSLFTKEDSQSATLSKPLQDDQHLGNSIYKITLGIRMG
NSNQQDLSDTFHKNAGDGVISNATTLTGVYKNKSYGIGLRTTNVDYAVHMHCKVKLRQGV
TLDDIQDAYTWANTSTYGRTTNSAYTFISGRERWKEPNLKRTKSDNLPPKLYFNGKEISD
SNNSITVYQGDTPTIKFGTSDDSGKVTKFSVSGLPDFAKNGNVDEKNDNGIDASESNPHT
KVINKTTFIHKDKSGNPVNSDYTITVSATDTSGNKAEKQVKIKLENLNKKYKEPTATPIT
VDWGHALTENDLKPHVTGIEGGGKLVFNPFPQTNIPQEYFNGRETLPANASAKVVYSDNS
YHVVTIPVYIKKPLSLQHKLNGNTVNATVGDKLTKTKDGNKVDAKQYLGITDKNVKDKIK
SAEWVNGEPSTNVAGKKTYTAKVTFSDGSTAEEKVTFTVRPQKPKIETDLTGVAGVKGKE
VVVNAGPGTAGSTVTLKNSKGQQIGTGTVGADGKVTITVANGIPEGNITAVTTTADSVSS
DASDAKKATKDDKAPTLTADKDSFTVKVGEDLKIQLTAKDDVKIESIDTATATMALFNND
PTKLLSNPTRAGVKYDSKNNTDTQKKLTYTFSGFKPEEVGTYTLTFSATDAAGHKTEKTV
TVKVEKKEDIKPRNITVDLGHKLDEKDAKKAIANHRSLPKGTKFAWSKETNGTPDTSTVG
KEKSGKVIVTIPTNDKNHPRVETVDVKVTVRDNESPKVAIQQKGDGGTYNTIDPGYPDGP
KYPPVFTITTYRGDKNDIKITATDNSGEVTTLTLTPKTPGETEKAPTGTGTTADPKTLTL
DGTTPLNTKPGEYTRTITAVDPSGNTNKVTVKFIVKPQSDKYSKVTGTPVTYNMSDGTKH
PDPKSGIDLEAVKKLPKDAKYSWAKEPDWNKPGKDTTATVRITFPDGSTKDVETKVTVKD
NIAPVIENPATNQVKHDDKQMYYQFKVHKDKPFDIEIKSYDNSGKISSATISTFPGYDGK
ITVDNQNGNSAEKPATIHIKGTGKRDPKLTNSSDNKWSRDLIVKDEAGNTSKLKVQISVY
TDAEEHNAAPNATPKNPDQNAITNAIIITKKDDPKKTPIDKKDLTFTVGNIPQDDGVHTV
PVTITYPDHSTTIVNVPVLIHKDAKDYDPKGQTVEVPWNTKPEELTKKITSFDNGGGLTW
NGTSGKDKLKSVEIVNTKDVPSTDKPGESQVQVKVTYKDGSSDVATVTVRVLKPQSETYK
PEGQTINIDYNKTPNAGISSKITGVGKDKGISFGKDKQGKDITLPEGASIAIDDKAKTVP
DGTQPGTFDIPVTITYKDGSKDHATVKVTVGKPQSETHTPKVDGGITKKYGESGPSDNDI
ITKVTVPNQPTGTTITVDKGQTPIDTKTPGTVNVKVTVKYPDGSEDHVEVPVTVGNPDNE
TYKPGAEAINKKRNDPAPTAEDIKNAVKTSTVKDKPAPKETKVELVDPKTPLPTTDKTGT
TNVPVKVTYPDGSSTVVQVPVVVTDTDATANTPAVDPVEEPYGTDKEKTKKAVTAAVTVP
DFKPKKDGDKPTVTITSADKDIPDGTKPGTYHVKVKVTYPDNTTDEVTVDVTIKNKQSDT
FEPKVTPVVKPFGKQVTSDDVTKNVTVPDWSKDSKEQPKIELNEPNQTLPDGQTPGNSTV
KVKVTYPDGTTDTVDVPVTISNKQSELYPPKVDNLEKDNGQKPSNDEIIGKVSVPTWPTN
ETNKPTYSIADGDKSKIPNGDKAGKFEVPVTVTYPDGSTTVINVPVTIKAPTATAKVVTV
PKGVEPKPEDSIVNKDKFPNGTKFEWDNNGKPDTSKEGNSVKGKVKITIPGSDTPQEVEV
KVNVVDPSASEVNVPQGKDLPEAKDVIKDSHDTSKFPNGTTFEWKPEDKPDTNNPGAKNG
KIIVTIPGQKPVEVSVTVNVLPKPEANVVNVPQNGTLPEAKDVIKDSSDTSKFPNGTTFE
WEDSGKPTTDTVGEKTGGKVKVTIPGVNGKSGYTIDVPVTVNVNPVPIAKETTVPQNSNP
DPKNSIDNNNKLPKGTTFEWKKDAAPKTDKPGTASGTVIVKIPGQAPQEVPVTITVTPAP
VANDVTVLQKKNGDTTDTTPKPEDVIKNHKDLPKDASISWKKKPDTSKTGNQPGVVTVKV
PGEPDVDISVNVFVVPNPAGKTVSVHVGDSPSAENSIANKDELPNGTKFAWATNGTPDTK
TAGKNKNGTVVVTIPGIANPVNVPVIVNVVEQNKPFINGGKAENTPDKSDKTTITGKGTP
GATIKVQNSNGTALKDGDKEITVTVDEDGSFTVDVPHQTPGTTLKLVPSKGGVDGDATTV
IVTAKPQKPTITVPTDNQKNDGNVTVTPPTDDTTVVKIEINAKPNSINGPEQPVRTIIAK
KDNNGKWKIDGDAPEGVTVNPDTGVVTIPTKNLEDGSTITAVSKNKTDKPSDPATAVTGF
KTPQISEQTLKDNPDDSTKQIITGKTLPGATVTVTDNNGNQIGTGTADKDGNFTITIDKQ
KPGAIVTLTPTNGKGDGAKTGDSVNITVNGNITKPKIDTPAEGGASVTPDLTDTRVNKVV
VTYTPEGSETTATITVVAEGDKHEWKIDGDAPEGVTVNPQTGVVTIPANKIKHGSTITAQ
SEDSSDKTGKSKSEVVTAKVGEKEKPAPEPTPTPAGEPTILTPQDGVEQGSATVTPPADA
DTLEITYTPEGDTTTPVTITVKKDKNGNWTIDGNTPTGVTVDPKTGKVTIPATQIKDGST
ITAQAKKNGQPSNKANGKVGNNPTKKPTPTPTPTPAGEPTILTPQDGVEQGSATVTPPAD
ADTLEITYIPEGDTTTPVTITVKKDKNGNWTIDGNTPTGVTVDPKTGKVTIPATQIKDGS
TITAQAKKNGQPSNEANGKVGNNPTKKPTPTPEPAPTPEPAPAPTPEHESGSHDSDEHTG
NSENNRNKSNNTQLQAPKSPAHHSSGHVAQSKLTNTGSAITSAGAVAALAAAIGAAFAVI
IRRKKRD
NT seq
9564 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataacaaccgcaaaaagcatgcacgcgagcaagttgagagctcgtttaaaaac
gttgattcatcttctgcgtatgcaaccatgcgcaaggtgtcattgagcacacttgccaca
gttcttactgccgccacttgcttgggcggtcagccaatcctcgcatcctctaatattctt
cttcctccaactacggcagcttttgcgcaagaagtgcgtaacgcagaccctactccttgg
ctacatacgccaaacattcttgagttccaaaggtatcgctttgctaacagcaatggaaca
atcggtcaaataggatccgacggtttgggtgattacagtaatactactaaaaagtcggat
atgtatgcacaccttgaagaaaacaacggtgctaagtatttagtcttcgatgtgttcttt
aacaacgacggtaaagatatgactggcgcttccaagcaacaacagtatgtttggcaaatt
ccttttgcagttgctgacttaaataatggttattacaatggagacacattaagtgattta
agctttgatttttataaacgaaatggcactagtccacaaacaacaaacgctgttctttca
cgcgatttttcattattcactaaagaagatagccaatcagcaacacttagtaagcctttg
caagatgatcagcaccttggaaattctatttacaaaataaccttgggcatacgcatgggg
aatagcaaccagcaagatttgagtgatactttccacaagaatgcaggcgacggggttatt
agcaatgctacaacattaacaggcgtatataagaacaaaagctacggcatcggcttaaga
actacaaacgtcgactatgcagtacacatgcattgcaaagtaaaattacgtcaaggagtc
actcttgacgacattcaagatgcttatacatgggcaaatacaagtacttatggtagaacg
actaactctgcttacacctttatttctggtcgcgagcgctggaaagaaccaaatcttaag
cgcacaaaaagcgacaatttacctccaaagctgtattttaatggcaaagagattagcgat
tccaacaacagcattaccgtgtatcagggcgatactcctacaatcaaattcggaacatct
gacgacagtggaaaagtaacgaaattctctgtaagcggattgccagactttgctaaaaat
ggcaatgttgacgagaaaaacgataatggtattgatgctagcgaaagcaatcctcatacc
aaggttattaataagactacatttatacacaaagataaaagtggcaatcctgtaaactcc
gactacacgattactgtctctgcaaccgacacttctggaaacaaagcagaaaaacaagta
aaaataaaacttgaaaaccttaataaaaagtacaaggagccaactgctacaccgattact
gttgattggggacatgcacttactgaaaacgacttgaagcctcacgttactgggattgaa
ggcggagggaaactcgtctttaatccattccctcaaaccaatattccacaagagtacttt
aacggaagggaaactcttcccgcaaacgcatctgcaaaagttgtgtactcagataactcg
tatcacgttgttacgattcctgtatacattaaaaagccactttctttgcaacataagctt
aatggaaataccgttaatgctactgttggcgataagctcacaaagaccaaagacggcaac
aaagttgacgctaagcaatatcttggcataaccgataagaatgttaaagataaaattaag
agcgcagagtgggtgaacggcgaaccttctacaaacgttgcgggaaagaagacttacact
gctaaagtcacatttagcgacggcagtactgcagaagaaaaggtcactttcactgttcgc
cctcaaaagcctaagattgagactgatttgactggcgttgcaggcgtaaaaggcaaggaa
gttgtagttaatgctggtcctggcacagctggaagcactgtaacacttaagaacagcaag
ggccaacaaatcggcactggaaccgttggagctgatggcaaagttacaattacagttgct
aacggcattcctgaaggaaacattactgcagtaactactactgcagattccgtaagctct
gacgcaagcgacgctaagaaggctactaaggatgacaaagctccaacgcttactgccgat
aaagatagctttaccgtaaaagttggcgaagatctgaaaattcagcttactgcaaaagat
gatgtaaagattgaatctattgacacagcaacagcaacgatggctctgtttaacaatgac
ccaacaaagctgcttagtaacccaactcgcgctggagtcaagtacgattctaagaataat
acagacacacagaagaaacttacttatacattctccggctttaagcctgaagaggttggc
acttacactcttacgttctctgcaactgatgctgctggtcacaaaacagaaaaaactgtg
actgtaaaagtggagaaaaaagaagacattaagccgagaaatattactgttgacttaggt
cataagctagacgaaaaagacgcaaagaaggctattgccaaccacagaagcttaccaaaa
ggaactaagtttgcttggagcaaagaaactaacggcactccagacacttccactgttggc
aaagaaaagtctggaaaagttattgtaactattcctactaacgacaaaaatcacccacgc
gttgaaactgttgacgttaaggtaactgttagggataacgaaagtcctaaagttgcgatt
cagcaaaagggtgacggtggtacatataacaccattgatcctggatatccagatggtcca
aaatacccaccagtatttactatcactacgtaccgcggtgataaaaacgatattaagatt
actgcaacagacaatagcggagaagttacaactcttactttaacgcctaaaactccaggc
gagacagaaaaagctcctactggaactggcacaactgcagatcctaagactttgacgctt
gacggcactactccactcaacactaagcctggcgagtatacgcgtaccatcacagctgtg
gacccttcgggcaacactaataaagttactgtgaagtttatcgttaaaccgcaatcagat
aagtacagcaaagtcacaggaacgcctgttacgtacaacatgagcgacggcacaaagcat
ccggatcctaagagcggcattgatctagaagcagtgaagaaactgcctaaggacgctaag
tattcttgggctaaagaaccagattggaataagcctggcaaagatacaaccgctacagtc
cgcataacgttcccagacggctcaactaaagacgtggagacaaaagttaccgttaaggac
aatatcgcgcctgttattgagaaccctgctacaaatcaggtgaaacatgacgataaacaa
atgtactaccaatttaaagtacataaagataagccttttgatattgaaattaagtcttac
gataacagcggcaagattagtagcgcaacaatatcaacattcccaggctacgacggaaaa
atcactgttgacaatcaaaacggaaattctgcagaaaagcctgcaactattcatattaag
ggcactggaaagcgagatccgaagttaactaattcgtccgataacaagtggtctcgtgat
cttattgttaaagacgaagctggcaatacatccaagctaaaggttcagatttccgtatac
acggatgctgaagagcataatgctgctcctaatgctacaccaaagaatcctgaccaaaac
gctattacaaacgcgattattattaccaagaaggatgacccgaagaagaccccaattgat
aagaaagatttgactttcacagttggaaatattcctcaagatgatggtgttcacactgtt
cctgtaacaattacatacccggatcattcaactacaatagttaatgttcctgtgttgatt
cataaggatgctaaggattatgatccaaagggtcaaacagttgaagttccatggaacact
aagccagaagaattgactaagaaaatcacgtcatttgataatggcggcggcttgacgtgg
aatggcacatctggaaaagataaactcaagtcagtagaaatcgtcaacacaaaagacgtt
ccaagcaccgataagcctggcgaaagccaagtgcaggttaaggttacgtataaggatggc
tctagtgacgttgcaacagtaactgttagagtgctgaagccacaaagcgaaacttataag
ccagaaggtcaaacaattaacattgactacaataagacgccgaatgcaggtatatccagc
aagattaccggcgttggcaaggataaaggtattagctttggtaaagataagcaaggcaaa
gatataacgcttccagaaggcgcaagtattgctattgacgacaaagctaagactgttcca
gatggcactcagcctggtactttcgatattcctgtaaccattacgtataaggatggctct
aaagatcacgcaacagtaaaggttactgtaggaaagcctcagagtgaaactcatacacca
aaggttgacggcggaatcactaagaagtatggagaaagtggtccttctgacaatgacatc
attactaaagtcactgttccaaaccaaccaactggtacaacaattacggttgataaaggt
caaacacctatcgacactaagactcctggaaccgtaaacgttaaggttactgttaagtat
cctgacggttctgaggatcacgtggaagttcctgtaacagttggcaatccagataacgaa
acctacaaaccaggcgcagaagctatcaacaagaagcgtaatgatccagcacctactgct
gaagacattaagaatgctgtgaagacttctacagttaaggataagcctgctccaaaggaa
acaaaagtagagcttgtagatccaaaaactcctctaccaactacagataagactggcaca
actaacgtacctgttaaggtcacatatccagatggttccagcactgttgtgcaagtgcct
gtagtagttacagacactgatgccactgcgaacactcctgcagttgaccctgtagaagag
ccgtatggtactgataaagaaaagaccaagaaagctgttacagctgctgtaactgttcct
gattttaagccaaagaaggacggcgataagccaacagtcactatcacaagcgccgataag
gatattccagacggcacaaagcctggcacttatcacgttaaggttaaggtcacgtaccca
gataacacaactgatgaagttactgttgatgtgactattaagaacaagcagtcggatact
ttcgagccaaaggtaacacctgttgttaagccgtttggcaagcaggttacatctgatgat
gtaactaagaatgtaactgttcctgattggtcaaaagattcaaaggaacaaccaaagatt
gagttgaacgaacctaaccagactttgccagacggtcaaactcctggaaactctactgtt
aaggttaaagtcacctacccagatggcacaactgacactgttgacgtgccagtaactatt
agcaataagcagtctgaactttacccacctaaggtagataatcttgaaaaagataatggt
caaaagccttcgaacgacgaaattatcggcaaagtaagtgttcctacctggccaacgaac
gaaacaaataagccaacttactctattgctgatggcgataagtctaagatccctaatgga
gataaggctggcaagtttgaagtgcctgtaacagttacgtatccggatggatcaacaact
gttattaacgtacctgtaactatcaaggctccaactgctacagctaaagttgtgactgtg
ccaaagggcgtggagcctaagccagaggacagcattgtcaataaggataagttccctaat
ggcactaagttcgagtgggataacaacggaaaaccagacacatctaaggaaggtaacagc
gtaaaaggcaaagtaaagattactattcctggatctgatactcctcaagaagttgaagta
aaggttaacgttgttgacccaagtgcatctgaagtcaacgtgccacagggcaaggatttg
ccagaagctaaggatgttattaaggattctcacgatactagtaagttccctaatggcact
acgttcgagtggaaacctgaagataaaccagatactaacaatcctggcgcaaagaatggc
aagattattgttactattccaggtcaaaagcctgtggaagtgtctgtaacagtgaacgtt
ttgccaaagccagaagcgaatgttgtgaacgttccacaaaatggcacattgccagaagct
aaggatgttattaaggattctagcgataccagtaagttccctaatggcactacgttcgag
tgggaagatagtggcaaaccaactacagataccgttggagaaaagacaggcggtaaagta
aaagtcaccattccaggtgtaaatggcaagtctggttatacgattgatgttcctgtaact
gtgaacgtaaaccctgtgcctatagcaaaggaaaccaccgtcccacagaacagcaatcct
gatcctaagaacagcattgataacaacaacaaactccctaagggaaccacattcgagtgg
aagaaagatgctgccccaaagaccgacaagccaggcactgctagtggcacagtgattgtc
aagattccagggcaagcacctcaagaagtgccagtaacaattactgtgacaccagcacct
gttgcaaacgacgtaactgtgttgcaaaagaagaatggtgacacaactgacactactcct
aagccagaggatgttattaagaatcataaggatctacctaaggatgctagtatttcttgg
aagaagaagcctgatacatcaaagactggcaaccaaccaggcgttgtgaccgttaaagtg
ccaggcgagccagatgttgacatttcagtcaatgtgttcgttgtgccaaatccagccggt
aaaacggtgagcgtacatgttggtgattctccaagcgcagaaaacagcattgccaataag
gatgagttacctaacggaaccaagtttgcttgggcaactaacggtactccagataccaag
acagctggaaaaaataagaacggcactgtcgtggtaactattccgggtatcgcaaatcct
gtgaacgtaccagtaatagtaaacgttgtggaacagaacaagccatttattaatggtggc
aaagcagaaaacacaccagataagtctgataagacaactattactggtaagggaactcct
ggagccactatcaaggttcaaaacagtaatggcaccgcattgaaggatggcgataaagaa
ataactgtcactgtagatgaagatggcagctttaccgttgatgttcctcatcagacccct
ggcacaacactcaagcttgttccaagcaagggtggagttgatggtgacgcaactactgta
atcgtcacagctaagccacaaaagccaacgattacggtaccaaccgacaaccagaagaac
gacggaaacgtaactgtaactccgccaactgatgacacaacggttgtgaaaattgaaatc
aatgctaagccaaattcaatcaatggtccagaacagccagttcgcacaattattgctaag
aaggataacaatggtaagtggaagattgacggagacgctccagaaggcgtaaccgttaat
ccagatactggcgttgttactattccaacaaagaatttggaagacggcagcactattact
gcagtatctaagaacaagacggacaaaccatctgatcccgctactgctgtaactggcttt
aagactccacagattagtgagcaaacgctaaaagacaatccagatgattctactaaacaa
atcatcactggaaagactcttccgggcgcaacagtaactgttaccgataacaatggcaat
caaatcggaactggtaccgcagataaagatggcaacttcactattactatcgacaagcaa
aagcctggtgccatcgtcaccctcacaccaaccaacggtaagggtgatggtgcaaagaca
ggcgatagcgtaaatattactgtcaacggaaatataactaagccaaagattgacactcca
gccgagggtggtgctagcgtgacgcctgatctcacggatacgcgcgtgaacaaggttgta
gttacttacactccagaaggcagtgaaacaaccgcaacgattactgttgttgctgaaggc
gacaagcatgagtggaagattgacggagacgctccagaaggcgtaaccgttaatccgcaa
actggcgttgttacgattccagcaaacaagattaagcacggtagcactattactgcgcaa
tcagaagacagtagcgataagactggcaagagcaagtcagaagtggtaactgctaaagtt
ggcgaaaaggagaagcctgcgccagaaccaacgccaacgcctgcgggtgagccgactata
ctcacgccacaagatggtgttgagcaaggttccgcaactgttaccccaccagcagatgct
gatactctcgaaatcacgtatactccagaaggcgatacaacgactcctgtaacaattacc
gtgaagaaagataagaatggtaactggactattgacggtaacactccaaccggcgtgact
gttgatcctaagactggtaaagtcaccatccctgcaacccaaatcaaggatggtagtacg
attaccgcgcaagccaagaagaatggtcaaccatccaacaaggcaaacggtaaagtagga
aacaacccaaccaagaaaccaacaccaacgccaacaccaacgcctgcgggtgagccgact
atactcacgccacaagatggtgttgagcaaggttccgcaactgttaccccaccagcagat
gctgatactctagaaatcacgtatattccagaaggcgatacaacgactcctgtaacaatt
accgtgaagaaagataagaatggtaactggactattgacggtaacactccaaccggcgtg
actgttgatcctaagactggtaaagtcaccatccctgcaacccaaatcaaggatggtagt
acgattaccgcgcaagccaagaagaatggtcaaccatccaacgaggcaaacggtaaagta
ggaaacaacccaaccaagaaaccaacaccaacgccagaaccggcaccgacaccggaacca
gcacctgcgccaaccccagaacatgaatctggttctcatgattctgatgaacacactggc
aacagtgaaaacaacaggaataagagcaataacactcagttacaagctcctaagtctcct
gcacatcactcctccggtcatgttgcgcaatcaaagttaaccaatacaggctctgcaatt
acttcagcaggcgctgttgctgcactcgcagccgcaataggtgctgcattcgcagtcatt
attcgcaggaagaagcgcgactaa
DBGET
integrated database retrieval system
