Gardnerella vaginalis HMP9231: HMPREF9231_0386
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Entry
HMPREF9231_0386 CDS
T01939
Symbol
fni
Name
(GenBank) isopentenyl-diphosphate delta-isomerase, type 2
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00900
Terpenoid backbone biosynthesis
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Module
gvh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HMPREF9231_0386 (fni)
Enzymes [BR:
gvh01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
HMPREF9231_0386 (fni)
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Gene cluster
GFIT
Motif
Pfam:
FMN_dh
GHMP_kinases_N
GHMP_kinases_C
Glu_synthase
IMPDH
MVD-like_N
NMO
SepSecS
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
AEF31648
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All DBs
Position
479380..481401
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AA seq
673 aa
AA seq
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MQIVDDFARETKEVKNVLLDEGKPAINLYNLQIESDLDDKKTGKKYGLGSSAAVTVAAVR
ALCKWYGLTLTTPELCKLAIIASSLVKKSGSGGDVAASAYGGWVMYRAYNREWLEAEIEM
IESGDSSLHKLLRKKWPRFEVKRLKVGAGLRLLVGWTGNPASSAELVGSVKAGVKAGDLT
AHNPSKTSAKTYSKTYEDFCVQSEKCVQKIANALENGRIDALLSGFARNRALLKDLGEIT
GTLIETPKLTRLIEVANGAGLPSKTSGAGGGDCGIAIARAEDFDAVFARIEEEWQNSGIE
ALNLKVAEFDESGDLSLIEQRKDDHIKLACEQYDAHADAGFEHVRFIPNALPQLALSDVD
TSVSVFDETTKWDTPLYINAMTGGSKKGENINESLARVAAKTGLAMASGSLSAALKNPHL
EETFSVIRRFNPHGFVMANVSAGVSAEQAIKAVEILQANALQIHLNAAQELVMSEGDRDF
SAWLNNIEAIARELDSMKVPVVVKETGCGMSAHDVLRLKNVGVRAVDVGGRGGTNFVAIE
NARRGRKSDYEFLDYWGLTTVESLLDIAQCDEILCEPRDSSDSCNSARMQVFASGGVRTP
LDVVRSLRLGASAVGVAGEFLHTLINEGEDALVEQIESWKAQIRVIMALLGCKNIEDLRE
NSRILIDDKPCVI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagtagacgattttgcgcgcgaaacaaaagaagtaaaaaacgttctactagat
gaaggaaagccagccataaacctatacaatctacaaatagaaagtgatttagacgataaa
aaaacaggcaaaaaatacgggcttggatcatctgcagccgtaacggtggcggctgtgcga
gcgctgtgcaaatggtacggattaacgcttacaacgccagaattgtgcaagctagccata
attgcatcgtcgctagtaaaaaagtcaggaagcggcggagacgtggcagcaagcgcatac
ggcggatgggtaatgtaccgcgcgtacaatcgcgaatggcttgaagcagaaatagaaatg
attgaaagtggagactcaagcctacacaagctgcttagaaaaaaatggccgcgatttgaa
gtaaaacgattaaaagtaggcgcaggcttgcgactcttagttgggtggacggggaatcct
gccagcagtgcagaacttgttggaagtgtaaaagctggagtgaaggctggcgatttaacc
gcgcacaatccctctaaaacaagcgctaagacttactctaaaacatacgaagatttttgc
gtacaaagcgaaaaatgcgtgcaaaaaatcgcaaatgcgctagaaaatgggcgcatagac
gcgttattaagcggatttgcgcgaaatcgtgcgctgctaaaagatcttggcgagatcaca
ggaacattaatcgaaacgccaaaactcacgcggctaatagaagttgccaatggtgcagga
ttgccgtccaaaacaagtggagcaggcggaggagattgcggaatcgcgattgcgcgcgcg
gaagattttgatgctgtgtttgctcgcattgaagaagaatggcaaaacagcggtattgag
gcgcttaatctgaaagtcgcagaatttgatgaaagcggcgacctctcgcttattgaacaa
cgcaaagacgatcacataaaactcgcgtgcgaacaatacgatgcgcacgcggacgctggt
tttgaacacgtgcggtttattccaaacgcgctgccgcaattggcattaagcgatgtagat
acaagtgtgagcgtgtttgacgaaaccacaaaatgggatactccgctgtatattaacgca
atgacgggcggaagcaaaaaaggcgaaaatataaacgagtcgctagcgagggtagctgca
aaaactggcttagcaatggcttctggctcgctaagcgcagcgcttaaaaatccgcatctt
gaagagacttttagcgtgattcgacgctttaatccgcatggatttgtaatggcgaatgta
agcgcaggagtgagcgctgagcaggcgattaaagctgtagaaattttgcaagcaaacgcg
ttgcaaatccacctaaacgcggcacaagagcttgtgatgagcgaaggagaccgcgatttt
agtgcgtggcttaacaatattgaggccattgcgcgcgagcttgattcaatgaaagtgcca
gttgttgttaaagagactgggtgcggaatgagcgctcatgatgtgctgcggttgaaaaat
gtgggcgtgcgtgcggtggacgttggcggacgcggaggcacgaattttgttgcgattgaa
aacgcaaggcgtgggcgtaaaagcgactacgagttcctcgactactgggggcttacaact
gtcgaatcgttgctagacatagcgcaatgcgatgagattttgtgcgagccgcgcgattca
tcggattcttgcaatagtgcgcgaatgcaagtgtttgcaagcggaggagtgcgtacgccg
cttgatgttgtgcgctcattgcggcttggtgcaagcgctgttggagttgctggcgagttt
ttgcacacgcttattaacgaaggagaagatgcgcttgttgagcaaattgagtcttggaag
gcgcagattcgtgtgattatggcgttgcttggatgcaagaatattgaggatttgcgcgaa
aattcgcggattttgattgatgataagccctgtgtgatttaa
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