Gardnerella vaginalis HMP9231: HMPREF9231_0399
Help
Entry
HMPREF9231_0399 CDS
T01939
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9231_0399 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gvh01007
]
HMPREF9231_0399 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gvh03016
]
HMPREF9231_0399 (cysS)
Enzymes [BR:
gvh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
HMPREF9231_0399 (cysS)
Amino acid related enzymes [BR:
gvh01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HMPREF9231_0399 (cysS)
Transfer RNA biogenesis [BR:
gvh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF9231_0399 (cysS)
Prokaryotic type
HMPREF9231_0399 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
CysS_C
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
AEF31780
LinkDB
All DBs
Position
complement(494685..496274)
Genome browser
AA seq
529 aa
AA seq
DB search
MLENTNRTLTAAAARLRLYNTATHNTSEFTTVTPGHVGMYVCGATVQSSPHIGHIRAAIA
FDVVRRWLLRLGYTVTFVRNVTDIDDKIIKKASENGQTWWQRAYIYEREFTEAYNTLGVM
PPTVEPRATGHINDMVELIQRLINRGHAYAITGANGNPTGNVYFSVPSWQDYGALTHQNG
NSDGSNSDDKSSKADKYNPVDPADASPDKHDARDFALWKAPCDFDQKDARWNTPFGAGRP
GWHIECSAMSHRYLGDAFDIHGGGLDLRFPHHENEMAQTLAAGWKSANVWMHSAWVTSKG
EKMSKSLGNGLSVPSVLAQKSAWVVRYALGGVQYRAMLEWSDQSLNEAQSAYDRISNFLE
RANRVIENQPDYAEVQSVDADNLPKDFTKAMNDDINVSGALAAIFTAIRSGNSLLDDYAQ
NQNENQSNGIKSLIKTCVLQVRAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEHKVL
ESLIANQLEQRAIARAAKDFARADAIRDSLTAAGVVIEDCAQGSSWHLS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaatacgaacagaactcttacagcagcagcggcacgattgcgcctatataac
acagcaacgcacaacactagcgagtttacaacagttactcctggccacgttgggatgtac
gtgtgtggcgcaactgtgcaaagctcgcctcatataggtcatattcgcgcagcaatcgcc
ttcgatgttgttcgccgatggcttttgcgccttggctacactgttacttttgttagaaat
gttacagatattgacgataaaatcatcaaaaaagctagcgaaaatggccaaacatggtgg
cagcgcgcctacatttacgagcgcgagtttactgaagcttacaacactcttggcgttatg
ccgcctactgtggagccgcgcgcgactggtcacataaacgatatggtggagcttatacag
cgcttgattaatcgcggacacgcatacgcaataacaggcgcgaatggcaatcctactgga
aacgtgtattttagtgtgccaagttggcaagattacggcgcgctaacgcatcaaaatggt
aattcagacggcagcaatagcgacgacaaatccagcaaagccgacaaatacaatccagtt
gaccctgctgacgcaagcccagataagcatgatgctcgcgattttgcactttggaaagca
ccttgcgattttgaccaaaaagacgcgcgctggaacacgccgtttggagcaggacgccca
ggttggcacattgaatgctcggcaatgagccaccgctatcttggcgatgctttcgacatt
cacggcggcggactagacttgcgcttcccacaccacgaaaacgagatggcgcaaacactc
gctgctggatggaaaagcgcaaacgtgtggatgcactccgcgtgggttacatctaaaggc
gaaaaaatgagcaaatcccttggaaacggcctttcggttccatcggttctggctcaaaaa
tccgcgtgggttgtgcgatacgcgctaggcggcgtgcagtaccgcgcaatgcttgagtgg
tcggatcaatctttgaacgaggcacaatctgcttatgatcgcatatctaacttcctcgag
cgcgcaaatcgcgtaatcgaaaatcagccagattatgcggaagttcaaagcgttgatgca
gataatcttccaaaagattttactaaagctatgaacgacgatattaacgtttcgggcgcg
ttggctgcgatttttactgcgattcgctctggtaactcgcttttggatgactatgcgcaa
aatcaaaacgaaaatcaaagcaacggcattaaaagccttattaagacttgtgttttgcaa
gttcgtgcaatgctagacactcttggactagacccttattctccacaatggcgcaatctt
tcgcaaaaatcgcaagatttaggtgcgaataatggcgcaagcgcggagcataaggttctt
gaatctttgattgcaaatcagcttgaacaaagggctattgcacgcgcagctaaggatttt
gcacgcgcagacgcgattcgcgactctttaaccgccgctggcgttgtaatcgaagattgc
gcacaagggtcatcgtggcatttgtcttaa
DBGET
integrated database retrieval system
