Gardnerella vaginalis HMP9231: HMPREF9231_0438
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Entry
HMPREF9231_0438 CDS
T01939
Symbol
rpsD
Name
(GenBank) ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HMPREF9231_0438 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gvh03011
]
HMPREF9231_0438 (rpsD)
Ribosome [BR:
gvh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HMPREF9231_0438 (rpsD)
Bacteria
HMPREF9231_0438 (rpsD)
Archaea
HMPREF9231_0438 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AEF31560
LinkDB
All DBs
Position
540005..540631
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AA seq
208 aa
AA seq
DB search
MTNIQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRL
RAQYGLSEKQLRAAYEKGTHTAGQTGDAMLTDLETRLDALVLRAGFARTTAQARQFVVHR
HILVDGNLVDRPSYRVKPGQTIQVRAKSQTMVPFQMAAEGVHRDVLPAVPGYLDVNLASL
KATLTRKPEVDQIPVEVNIQYVVEYYAR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattcagcgttctcgccgtcaggtgcgtctttctcgcgccctcggcatcgct
ttgaccccaaaggctcagcgtattttcgagaagcgtccatatgctccaggtgagcacggc
cgcactcgtcgtcgtaccgagtccgattacgcagtacgtcttcgcgagaagcagcgtctt
cgcgctcagtacggtctttccgagaagcagcttcgtgcagcttacgaaaagggtacgcac
actgcaggtcagactggtgacgcaatgctcaccgatttggaaacccgtcttgacgcttta
gttttgcgcgcaggctttgctcgcacaaccgctcaggctcgccagtttgttgtgcatcgt
cacattttggtagatggcaatcttgttgatcgcccatcctaccgtgttaagccaggccag
accattcaggttcgcgctaagagccagacaatggtgccattccagatggctgctgaaggc
gttcatcgtgacgttttgccagcagttcctggttacctcgatgtgaatcttgcctctttg
aaggctactttgactcgtaagccggaagtcgatcagattccagttgaagtcaacatccag
tacgtcgtcgagtactacgctcgctaa
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integrated database retrieval system
