Gardnerella vaginalis HMP9231: HMPREF9231_0450
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Entry
HMPREF9231_0450 CDS
T01939
Symbol
aroB
Name
(GenBank) 3-dehydroquinate synthase
KO
K13829
shikimate kinase / 3-dehydroquinate synthase [EC:
2.7.1.71
4.2.3.4
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00400
Phenylalanine, tyrosine and tryptophan biosynthesis
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
gvh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
HMPREF9231_0450 (aroB)
Enzymes [BR:
gvh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.71 shikimate kinase
HMPREF9231_0450 (aroB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.4 3-dehydroquinate synthase
HMPREF9231_0450 (aroB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DHQ_synthase
DHQS_C
SKI
Fe-ADH_2
Fe-ADH
KTI12
AAA_16
AAA_33
AAA_17
AAA_18
Cytidylate_kin2
6PF2K
Motif
Other DBs
NCBI-ProteinID:
AEF32059
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All DBs
Position
552233..553975
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AA seq
580 aa
AA seq
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MSEEDSLHDSLPDSLRDSLKDISQDVSQTQMPLAVIIGMPAAGKTRVGKELAHILNVPFI
DTDDLIEQKINMPIAQYFKDFGEESFRDIETQIVRDATFPDFEQSAPIVALGGGAPMRKE
TQDVLRKYTKLGGRVVYLQVNASDAIERVSWNSNRPMLSGEDGAKRWMDLFDKRDPVFCK
VANLHARVYGLTPKPAARKVKDMIMQRIVHVDGKGIEDYDVHIGAGAMSLLPQMLGKQPV
RVALIHTQPVQRHSDKARSILRAAGYDVFDILIPDAEAGKTVKVADFVWSRLANAGFTRS
DAIVGLGGGAATDLAGFVASTWMRGIRYVNCPTSLLAMVDASTGGKTGVNTAAGKNLVGS
FYTPVGVLADTCAFSTLPNDIFVEGLGEVAKSGFIDDSSILKILENPQNAGKLRSVDGPS
ILDDADLNNMVCDLIEKSVRVKAYHVSNDLKEQGLREFLNYGHTLGHAIEQIEHFSWRHG
NAVAVGMVFAASLAQILGYLSPEDVEYHRSLLKSLGLPISWNGGGNNDDAFAKVLDLMHK
DKKARGNTLRFVVLDGIGNPIHLDNPPLEAIREAFNKIRG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagattccttgcatgattccttgccagattcgcttagagattctttgaaa
gacatttcgcaagatgtatcgcaaactcaaatgccgttagccgttataatcggcatgcct
gcagctggaaaaacgcgtgttggcaaggaattagcgcatattttgaatgttccttttata
gatacagacgatttaattgagcaaaaaatcaatatgccgattgctcaatattttaaggat
tttggcgaagagtcttttagagatattgaaactcaaattgttagagatgctactttccca
gattttgagcaatccgccccaatagtcgccctaggtggcggtgctccaatgcgtaaggag
acgcaagatgtcttaagaaaatatacaaagctaggcggtcgtgttgtgtatttgcaagta
aatgcaagtgatgcaattgagcgcgtaagctggaattctaatcgtcctatgttaagtggc
gaagatggcgcaaaacgatggatggatttgtttgataagcgtgatcctgtgttttgcaaa
gtggcgaatttacacgctcgcgtttacggattaacgccaaaacctgccgcaagaaaggta
aaagatatgattatgcaacgaatcgttcatgtagatggtaaaggtattgaagattacgat
gttcatattggcgcaggcgctatgagtcttttacctcaaatgcttggaaaacagcctgtt
cgagtagctttaattcacactcagcctgttcaaagacatagcgataaagcaagatctatt
ttgcgcgcagctggctacgatgttttcgatattcttattccagacgcagaggctggtaaa
actgttaaggttgcggattttgtgtggtcgcgccttgcaaacgctggttttacgcgttca
gatgcgattgttggtttgggtggtggagcagctacggatttagctggatttgttgcttct
acttggatgcgtggaatccgctacgtaaattgcccgacttcgcttcttgcaatggtagac
gcttcgactggagggaaaactggtgtaaatactgcagctggcaagaatttggttggtagt
ttttacactcctgttggcgttttggcagatacttgcgcgttttctactcttcctaacgat
atttttgttgaaggacttggagaagttgcaaaatcaggttttattgacgattctagcatc
ttaaaaattctggaaaatcctcaaaatgctggcaagttgcgctctgttgatggtccttct
attttagacgatgcagatttaaataatatggtttgcgatctaatagaaaaaagcgtgcgc
gttaaggcataccacgtttctaacgacttaaaagaacaaggtttgcgcgagtttttgaat
tatgggcatactttagggcatgcgattgagcaaatcgagcatttttcttggcgtcatgga
aacgcggttgctgttggaatggtttttgcggcgagccttgcgcaaattttgggctattta
agtccagaagacgttgagtatcatcgctcgcttttgaaatcacttggattgccaatatct
tggaatggcggcggcaataatgacgatgcttttgctaaggttcttgacttgatgcataaa
gataaaaaagctagaggcaacaccttacgatttgttgttttagacgggattggaaacccg
attcacttagataatccgccgctggaggcgattcgcgaagcgtttaataagattagaggt
tag
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