Gardnerella vaginalis HMP9231: HMPREF9231_0456
Help
Entry
HMPREF9231_0456 CDS
T01939
Name
(GenBank) putative phosphonate C-P lyase system protein PhnK
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh01501
beta-Lactam resistance
gvh02010
ABC transporters
gvh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_0456
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9231_0456
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMPREF9231_0456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_0456
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
HMPREF9231_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
AAA_29
nSTAND3
DUF3987
AAA_16
RsgA_GTPase
ABC_ATPase
nSTAND1
ATP-synt_ab
Mg_chelatase
APS_kinase
Sigma54_activat
DUF87
PRK
Zeta_toxin
NTPase_1
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AEF31633
LinkDB
All DBs
Position
560535..562562
Genome browser
AA seq
675 aa
AA seq
DB search
MNTATRKNVDTLAMQREQGPLLEVKNLQVDFTTDSKKAVHAVRDASFNVYPGQWVAIVGE
SGSGKSTSAMAVLGLLPGTGHVTGGSIKLKGQEISNLKPKDYAALRGTAMGLVPQDPMSN
LNPVWRIGTQVKEALLANGVDVSHEKRSALAEALAGDAVEVKSNEDEIFLGSKELSALLD
AAKQALAQVGLSEQTNAEKFNEAMEYYKKEWVPGSETRWRVADDLIKYGVDDDKAWEIAK
KYVIGASVEDRIAGLLDEAGLPDAATRARQFPHEFSGGMRQRALIAIGLACRPDLLIADE
PTSALDVTVQKRILDHLHTLTDSLGTSVLFITHDLGLAAARAQHVVVMYKGRVVESGPSL
DVLQHPQHPYTKRLVAAAPSLASQRIISVKEHGGNADNLLEHHVVGEQALEKSEHIITVD
HLTREFKLPRKKELFKAVDDVSFSIKRGTTLAIVGESGSGKSTVANMVLRLLKPTSGTVT
YEGKNIAELKGADLLDFRRHVQPVFQNPYGSLDPMYSIYRSIEEPLRIHKIGDKKSRQNR
VRELLDMVRMPASVMTRFPNELSGGQRQRIAIARAMALDPDVIVCDEAVSALDVLVQDQV
LHLLNDLQAERGLSYLFITHDLAVVRQIADEVVVMQHGKLVEHATTDEVFDHPQKEYTRD
LLDAIPGGNLELGLD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagcaacacgtaaaaatgtagatacccttgcaatgcaacgtgagcagggtcct
ttgctggaagttaaaaatcttcaagttgactttacaacggattctaaaaaagccgtacac
gctgttcgcgatgcgagcttcaacgtttacccaggtcaatgggttgcaatcgtgggtgaa
tctggttctggaaagtcaacttctgcaatggcggttttaggcttgcttccaggaacaggt
cacgttacgggtggttctattaagcttaaaggtcaagaaataagcaatctaaagcctaaa
gattatgcggctttgcgcggtacagcaatgggattggttccgcaagaccctatgagcaac
cttaatcctgtttggcgaattggaactcaagttaaagaagctcttcttgcaaatggcgtt
gacgttagccacgaaaagcgctccgcacttgcagaagctttagcaggagacgctgtagaa
gtcaaaagcaatgaagatgaaatcttccttggctctaaagaactgagcgcattattggac
gctgcaaagcaagctttggcgcaggttggtcttagtgagcaaacaaatgccgaaaagttt
aatgaagctatggaatactacaaaaaagagtgggttccaggttccgaaactcgttggcgc
gttgcagacgatttaatcaagtatggcgtagacgacgacaaagcttgggaaatcgcaaaa
aagtatgttattggagcaagtgttgaagaccgcattgctggtttgcttgatgaagctggt
ttgccagatgcagcaactcgcgcaaggcaattcccacacgagttttccggcggtatgcgt
cagcgcgcgttaatcgcgattggccttgcgtgccgcccagatttgcttattgcagatgag
ccaacttccgcactcgacgttactgtgcaaaagcgcattcttgaccatttgcatacgctt
actgattctctcggcacttctgtgctctttattactcacgatttaggtttggctgcagct
cgcgcacagcacgttgttgttatgtataagggtcgcgttgttgaatctggtccatctttg
gacgttttgcagcatcctcagcatccttatactaagcgacttgttgctgccgctccaagt
cttgcttctcaacgaatcatttctgttaaggagcatggtggtaacgcggataatttgctt
gagcatcacgtagtaggcgagcaagctcttgaaaagagcgagcatattattacagtcgat
cacttaacccgagagtttaagcttccgcgcaagaaggagcttttcaaggctgttgacgat
gtttcgttctcgattaagcgcggaacaacgttggcaatcgtgggtgagtctggttctggt
aagtctactgttgcaaacatggttttgagattactaaagccaacaagcggaactgttacc
tacgaaggcaagaatattgctgaattaaagggcgcagatttgcttgatttccgccgacac
gtgcagccagtgttccaaaatccttatggttcactcgacccaatgtattcgatttatcgt
tcgattgaagagcctttgcgtattcataagattggcgataaaaagagtagacagaatcgt
gtgcgcgagcttttggacatggttcgcatgcctgcttctgttatgactcgcttcccgaac
gagctttcaggcggacagcgtcagcgcattgcgattgcgcgtgctatggcattggatccg
gatgtaatcgtttgcgacgaagctgtgtctgctttggatgtgcttgtgcaagatcaggtt
ttgcatttgcttaacgatttgcaagcggagcgaggattaagctacttgttcatcactcac
gatttggctgttgttcgtcagattgcagacgaggttgttgttatgcaacatggcaaactt
gttgagcatgctacaaccgacgaagtgtttgatcatcctcaaaaggagtacactcgcgat
cttctcgatgcaattccaggtggaaatttggaacttggcttggattag
DBGET
integrated database retrieval system
